DRSC/TRiP Functional Genomics Resources

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Protein Alignment bin and foxf2a

DIOPT Version :9

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_001077284.1 Gene:foxf2a / 407681 ZFINID:ZDB-GENE-110407-5 Length:383 Species:Danio rerio


Alignment Length:390 Identity:137/390 - (35%)
Similarity:184/390 - (47%) Gaps:55/390 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   267 SPPSQNHLENKVSGSAVVGTGGSSQQDAPSTPDTTKK--SGTRRPEKPALSYINMIGHAIKESPT 329
            |.|:.|.:.:.:..:..|      .:...:|.:..||  ||.||||||..|||..|..||:.|||
Zfish    18 SSPASNSMHSALQNTQTV------LESTTATGNKGKKSNSGMRRPEKPPYSYIAPIVMAIQSSPT 76

  Fly   330 GKLTLSEIYAYLQKSYEFFRGPYVGWKNSVRHNLSLNECFKKLPKGMGVGKPGKGNYWTIDENSA 394
            .:|||||||.:||..:.||||.|.||||||||||||||||.|||||:  |:||||:|||||..|.
Zfish    77 KRLTLSEIYQFLQARFPFFRGSYQGWKNSVRHNLSLNECFIKLPKGL--GRPGKGHYWTIDPGSE 139

  Fly   395 HLFEDEGSLRRRPRGYRSKIK-VKPYAGHANGYYASGYGDAGMDNGNYYASPAFASYDYSAAGAT 458
            .:|| |||.||||||:|.|.: :||.....||.   |:|          ||....::|:.:..|:
Zfish   140 FMFE-EGSFRRRPRGFRRKCQALKPMYRMMNGI---GFG----------ASMLPQNFDFQSPSAS 190

  Fly   459 GVSPAGGQGFADPWNA-HAAHSGSSSVGVGMGVGPLPQYTNISCLAAGGNVNGSATTPPLAHSAL 522
            ....|.........|| ...|:|...:|.|..|..:...|..:.:.|....:.....|..::|.|
Zfish   191 LACHANSYNLDMMSNAVQGVHAGYDGLGAGHHVSHMSPSTGSTYMTACQVASNGEYGPDSSNSPL 255

  Fly   523 GMAPSASSS---SSPLGAAAT--LQSDYAPTASLVAAGYSYATSAGSLDNGLRSISLQQLPGLSS 582
            ...|:.|.|   .||.|||:.  ..|..:|.........|..||:| |.:.:...||:|    |.
Zfish   256 HSPPTMSGSLECHSPYGAASAHGASSGVSPYIKQQPLSSSSPTSSG-LHSSMPPYSLEQ----SY 315

  Fly   583 IQHAQAQAQAQAHHHHHQHHAS------------------HPSHS-HQGHGSMHQNHGTSSTTPP 628
            :.|....:...:....:|.|:|                  |||.| ...|..:|.:.|......|
Zfish   316 LHHNGRDSADISGMSRYQSHSSPVCDRKDFVLNFNGITSFHPSTSGSYYHHQLHHHQGVCQDVKP 380

  Fly   629  628
            Zfish   381  380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 Forkhead 311..399 CDD:278670 58/87 (67%)
foxf2aNP_001077284.1 FH 58..146 CDD:214627 60/90 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 123 1.000 Domainoid score I5529
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 199 1.000 Inparanoid score I3759
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm25184
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR46262
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1971
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.960

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