DRSC/TRiP Functional Genomics Resources

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Protein Alignment bin and foxf2a

DIOPT Version :10

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_001077284.1 Gene:foxf2a / 407681 ZFINID:ZDB-GENE-110407-5 Length:383 Species:Danio rerio


Alignment Length:390 Identity:137/390 - (35%)
Similarity:184/390 - (47%) Gaps:55/390 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   267 SPPSQNHLENKVSGSAVVGTGGSSQQDAPSTPDTTKK--SGTRRPEKPALSYINMIGHAIKESPT 329
            |.|:.|.:.:.:..:..|      .:...:|.:..||  ||.||||||..|||..|..||:.|||
Zfish    18 SSPASNSMHSALQNTQTV------LESTTATGNKGKKSNSGMRRPEKPPYSYIAPIVMAIQSSPT 76

  Fly   330 GKLTLSEIYAYLQKSYEFFRGPYVGWKNSVRHNLSLNECFKKLPKGMGVGKPGKGNYWTIDENSA 394
            .:|||||||.:||..:.||||.|.||||||||||||||||.|||||:  |:||||:|||||..|.
Zfish    77 KRLTLSEIYQFLQARFPFFRGSYQGWKNSVRHNLSLNECFIKLPKGL--GRPGKGHYWTIDPGSE 139

  Fly   395 HLFEDEGSLRRRPRGYRSKIK-VKPYAGHANGYYASGYGDAGMDNGNYYASPAFASYDYSAAGAT 458
            .:|| |||.||||||:|.|.: :||.....||.   |:|          ||....::|:.:..|:
Zfish   140 FMFE-EGSFRRRPRGFRRKCQALKPMYRMMNGI---GFG----------ASMLPQNFDFQSPSAS 190

  Fly   459 GVSPAGGQGFADPWNA-HAAHSGSSSVGVGMGVGPLPQYTNISCLAAGGNVNGSATTPPLAHSAL 522
            ....|.........|| ...|:|...:|.|..|..:...|..:.:.|....:.....|..::|.|
Zfish   191 LACHANSYNLDMMSNAVQGVHAGYDGLGAGHHVSHMSPSTGSTYMTACQVASNGEYGPDSSNSPL 255

  Fly   523 GMAPSASSS---SSPLGAAAT--LQSDYAPTASLVAAGYSYATSAGSLDNGLRSISLQQLPGLSS 582
            ...|:.|.|   .||.|||:.  ..|..:|.........|..||:| |.:.:...||:|    |.
Zfish   256 HSPPTMSGSLECHSPYGAASAHGASSGVSPYIKQQPLSSSSPTSSG-LHSSMPPYSLEQ----SY 315

  Fly   583 IQHAQAQAQAQAHHHHHQHHAS------------------HPSHS-HQGHGSMHQNHGTSSTTPP 628
            :.|....:...:....:|.|:|                  |||.| ...|..:|.:.|......|
Zfish   316 LHHNGRDSADISGMSRYQSHSSPVCDRKDFVLNFNGITSFHPSTSGSYYHHQLHHHQGVCQDVKP 380

  Fly   629  628
            Zfish   381  380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 FH_FOX 312..391 CDD:469596 54/78 (69%)
foxf2aNP_001077284.1 FH_FOXF1 59..157 CDD:410823 68/100 (68%)

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