DRSC/TRiP Functional Genomics Resources

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Protein Alignment bin and foxg1b

DIOPT Version :9

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_998079.2 Gene:foxg1b / 405850 ZFINID:ZDB-GENE-040426-2437 Length:341 Species:Danio rerio


Alignment Length:313 Identity:94/313 - (30%)
Similarity:137/313 - (43%) Gaps:75/313 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   254 SSSPAKSLNGSESSPPSQNHLENKVSGSAVVGTGGSSQQDAPSTPDTTKKSGTRRPEKPALSYIN 318
            |.:|.:.|:    .||....::|             :|:||......|||.  ::.:||..||..
Zfish    39 SPAPVQDLD----KPPEDAEMDN-------------AQRDAEEPELQTKKG--KKFDKPPFSYNA 84

  Fly   319 MIGHAIKESPTGKLTLSEIYAYLQKSYEFFRGPYVGWKNSVRHNLSLNECFKKLPKGMGVGKPGK 383
            :|..||::||..:|||:.||.::.|::.::|....||:||:|||||||:||.|:|:  ....|||
Zfish    85 LIMMAIRQSPEKRLTLNGIYEFIMKNFPYYREHKQGWQNSIRHNLSLNKCFVKVPR--HYDDPGK 147

  Fly   384 GNYWTIDENSAHLF--EDEGSLRRRPRGYRSKIKVKPYAGHANGYYASGYGDAGMDNGNYYASPA 446
            ||||.:|.:|..:|  ...|.||||....|.|:.:|         ....:...|:..|...::|.
Zfish   148 GNYWMLDPSSDDVFIGGTTGKLRRRSATSRGKLVMK---------RGLRFAPLGLGLGERPSNPL 203

  Fly   447 F-----------ASYDYSAAG-----------ATGVSPAGGQGFADPWNAHAAHSGSSSVGVGMG 489
            :           :.|:.||.|           ..||.|.|....:.  ....|.|||.::..|.|
Zfish   204 YWQLSPFLPLHHSHYNGSAHGFLNQGHTYGTLLPGVEPLGNGDMSR--QILGASSGSINLSNGYG 266

  Fly   490 VGPLPQYTNISCLAAGGNVNG-------SATTPPLAHSALGMAPSASSSSSPL 535
            |.|          .|.|.::|       .|..|....||.|.  ..|||.|||
Zfish   267 VSP----------PAAGLLSGHNGYFVPGAQQPQSLPSAPGY--GISSSQSPL 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 Forkhead 311..399 CDD:278670 41/89 (46%)
foxg1bNP_998079.2 FH 77..165 CDD:214627 41/89 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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