DRSC/TRiP Functional Genomics Resources

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Protein Alignment bin and croc

DIOPT Version :10

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster


Alignment Length:513 Identity:129/513 - (25%)
Similarity:193/513 - (37%) Gaps:172/513 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 YSSSSSSPAKSLNGSESSPPSQNHLENKVS----GSAVVGTGGSSQQDAPSTPDTTKKSGTRRPE 310
            |.|:|:..|.|   |.|:..:.::..::.|    .::..|.|...|              .:...
  Fly    22 YGSASAVAAAS---SASAAAAAHYAYDQYSRYPYSASAYGLGAPHQ--------------NKEIV 69

  Fly   311 KPALSYINMIGHAIKESPTGKLTLSEIYAYLQKSYEFFRGPYVGWKNSVRHNLSLNECFKKLPKG 375
            ||..|||.:|..||:.:...|:||:.||.|:.:.:.::|....||:||:||||||||||.|:.: 
  Fly    70 KPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVAR- 133

  Fly   376 MGVGKPGKGNYWTIDENSAHLFEDEGSLRRRPRGYRSK--------------------------- 413
             ...|||||:|||:|.:|.::| |.||..||.|.::.|                           
  Fly   134 -DDKKPGKGSYWTLDPDSYNMF-DNGSFLRRRRRFKKKDVMREKEEAIKRQAMMNEKLAEMKPLK 196

  Fly   414 ------IKVKPYAGHANGYYASGYGDAGMDNGNYYASPAFASYDYSAAGATGVSPAGG---QGF- 468
                  ::.|..|.||..:......|.|..:|...:..|..:..:.:.........||   .|| 
  Fly   197 LMTNGILEAKHMAAHAAHFKKEPLMDLGCLSGKEVSHAAMLNSCHDSLAQMNHLAGGGVEHPGFT 261

  Fly   469 ---------------ADPWN---------------------------------AHAAH----SGS 481
                           |.|::                                 ||.||    .|.
  Fly   262 VDSLMNVYNPRIHHSAYPYHLNEDNLATVASSQMHHVHHAAAAHHAQQLQRHVAHVAHPLTPGGQ 326

  Fly   482 SSVGVGMGVGPLPQYTNISCLAAGGNVNGSATTP------PLAHSALGMAP-----SASSSSSPL 535
            .:.|...|..|    |.||  ...|..:|...||      |:.|:.....|     :.::|||.|
  Fly   327 GAGGQSSGHSP----TTIS--TPHGPAHGGWYTPETPPSEPVPHNGQQGTPTHPGHNNNNSSSVL 385

  Fly   536 -----------------GAAATLQSDYAPTASLVAAGYSYATSAG-SLDNGLRSISLQQL--PGL 580
                             |:::.|.|  :||::|......:..:.. .||.|..:.|||..  |..
  Fly   386 NHNGVGNGGGGGGGGGGGSSSVLTS--SPTSALGFRDMIFEQNQSCQLDTGSPTGSLQSASPPAS 448

  Fly   581 SSIQHAQAQAQA---QAHHHHHQHHA------------SHPSH--SHQGHGSMHQNHG 621
            :|:..|.|.|.|   .:|||||.|||            |:.||  .|.||   :|.:|
  Fly   449 ASVAAASAAAAAAVISSHHHHHHHHAALSGNLGQLGQLSNLSHYRPHVGH---YQEYG 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 FH_FOX 312..391 CDD:469596 37/78 (47%)
crocNP_524202.1 FH_FOX 69..159 CDD:469596 43/92 (47%)

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