DRSC/TRiP Functional Genomics Resources

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Protein Alignment bin and foxl1

DIOPT Version :9

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_957278.1 Gene:foxl1 / 393959 ZFINID:ZDB-GENE-040426-1181 Length:363 Species:Danio rerio


Alignment Length:171 Identity:60/171 - (35%)
Similarity:90/171 - (52%) Gaps:21/171 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   252 SSSSSPAKSLNGSESSPPSQNHLENKVSGSAVVGTGGSSQQDAPSTPDTTKKSGTRRPEKPALSY 316
            |..::.|..|:||     |..::.....|..:...|.:|.:..|             |:||..||
Zfish    11 SGVAASALGLSGS-----SLIYVYGGEVGGIIPALGFASGRQEP-------------PQKPPYSY 57

  Fly   317 INMIGHAIKESPTGKLTLSEIYAYLQKSYEFFRGPYVGWKNSVRHNLSLNECFKKLPKGMGVGKP 381
            |.:|..|||.:|..:.|||.||.::...:.::.....||:||:|||||||:||.|:|:..  |:|
Zfish    58 IALIAMAIKNAPDKRATLSGIYQFIMDRFPYYHDNKQGWQNSIRHNLSLNDCFIKVPREK--GRP 120

  Fly   382 GKGNYWTIDENSAHLFEDEGSLRRRPRGYRSKIKVKPYAGH 422
            |||:|||:|.....:||: |:.|||.|..|::.......||
Zfish   121 GKGSYWTLDTKCLDMFEN-GNYRRRKRKCRTQDTGDTKVGH 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 Forkhead 311..399 CDD:278670 40/87 (46%)
foxl1NP_957278.1 FH 52..140 CDD:214627 41/90 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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