DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bin and foxi2

DIOPT Version :9

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_944598.2 Gene:foxi2 / 387256 ZFINID:ZDB-GENE-031126-2 Length:383 Species:Danio rerio


Alignment Length:405 Identity:118/405 - (29%)
Similarity:166/405 - (40%) Gaps:94/405 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 STSTAKVQPLQVQLQPLNHQYASTIKYCSNNTILSANDYQLLTSQEQAGQQQPQQLPAQQLQHSP 223
            |.:.|.|..|| ||....|:.:....||.|.::                 ...|.|||.|   .|
Zfish    10 SNNNAAVNHLQ-QLPKSAHETSDMAVYCDNFSV-----------------YHQQSLPAAQ---RP 53

  Fly   224 GGGYMSRISTSPSQVISNAHGMPVLNYSSSSSSPAKSLNGSESSPPSQNHLENKVSGSAVVGTGG 288
            .|..:...:|....:..|..|:      :||||.....|.....||:.......:|.|:  |..|
Zfish    54 AGYGLGDYATPNPYLWLNGPGV------NSSSSYIHGNNSPSFIPPAYGSQRQYLSNSS--GFAG 110

  Fly   289 SSQQDAPSTPDTTKKSGTRRPE-----KPALSYINMIGHAIKESPTGKLTLSEIYAYLQKSYEFF 348
                     ||....|...:.|     :|..||..:|..||:.:...|||||:||.|:..::.|:
Zfish   111 ---------PDLGWLSIASQEELLKLVRPPYSYSALIAMAIQNAHEKKLTLSQIYQYVADNFPFY 166

  Fly   349 RGPYVGWKNSVRHNLSLNECFKKLPKGMGVGKPGKGNYWTIDENSAHLFEDEGSLRRRPRGYRSK 413
            :....||:||:|||||||:||||:|:  ....||||||||:|.|...:| |.|:.||: |..|| 
Zfish   167 KKSKAGWQNSIRHNLSLNDCFKKVPR--DEDDPGKGNYWTLDPNCEKMF-DNGNFRRK-RKRRS- 226

  Fly   414 IKVKPYAGHANGYYASGYGDAGMDNGNYYASPAFASYDYSAAGATGVSPAGGQGFADPWNAHAA- 477
                                   |:....:|......|...||..........|.|.| :|.|| 
Zfish   227 -----------------------DSSTGVSSNTKPEDDRQLAGIKPTDSPHLTGPASP-DADAAT 267

  Fly   478 --HSGSSSVGVGMGVGPLPQYTN----ISCLAAGGNVNGSATTPPLAHSALGMAPSASSSS---- 532
              |.|:|..|:...    |.:.|    :|.|       ||::||...|.:||:....||.:    
Zfish   268 DSHKGASPAGLASA----PCFNNFFNSMSAL-------GSSSTPTSRHGSLGLVNELSSRNISAL 321

  Fly   533 SPLGAAATLQSDYAP 547
            ||..|:...::..||
Zfish   322 SPYHASTGPEAGGAP 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 Forkhead 311..399 CDD:278670 42/87 (48%)
foxi2NP_944598.2 Forkhead 129..215 CDD:278670 42/88 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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