DRSC/TRiP Functional Genomics Resources

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Protein Alignment bin and slp1

DIOPT Version :9

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_476730.1 Gene:slp1 / 33607 FlyBaseID:FBgn0003430 Length:322 Species:Drosophila melanogaster


Alignment Length:352 Identity:99/352 - (28%)
Similarity:145/352 - (41%) Gaps:88/352 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 DLQYASSSTSTAKVQPLQVQLQPLNHQYASTIKYCSNNTILSAN-DYQLLTSQEQAGQQQPQQLP 215
            |...|....:|| .||  ::.:|::|.:.....|.:::..|||: |:.                 
  Fly    15 DAILAKKPINTA-TQP--IKTEPVHHHHQYVHPYSNSDGELSASEDFD----------------- 59

  Fly   216 AQQLQHSPGGGYMSRISTSPSQVISNAHGMPVLNYSSSSSSPAKSLNGSESSPPSQNHLENKVSG 280
                  ||     ||.||            |:    ||::....|.|..:......:.||:::..
  Fly    60 ------SP-----SRTST------------PM----SSAAESLSSQNNDKLDVEFDDELEDQLDE 97

  Fly   281 SAVVGTGGSSQQDAPSTPDTTKKSGTRRPEKPALSYINMIGHAIKESPTGKLTLSEIYAYLQKSY 345
            ......|..|::...:....||        ||..||..:|..||::||..:|||:.||.||...:
  Fly    98 DQESEDGNPSKKQKMTAGSDTK--------KPPYSYNALIMMAIQDSPEQRLTLNGIYQYLINRF 154

  Fly   346 EFFRGPYVGWKNSVRHNLSLNECFKKLPKGMGVGKPGKGNYWTIDENSAHLF--EDEGSLRRRPR 408
            .:|:....||:||:|||||||:||.|:|:  ....|||||||.:|.::..:|  |..|.|||:..
  Fly   155 PYFKANKRGWQNSIRHNLSLNKCFTKIPR--SYDDPGKGNYWILDPSAEEVFIGETTGKLRRKNP 217

  Fly   409 G--------YRSKI-----KVKPYAGHAN--GYYASGYGDAG-------MDNGNYYASPAFASYD 451
            |        ||..|     ...||...|:  ||.|..:..|.       |:...|.|  |:....
  Fly   218 GASRTRLAAYRQAIFSPMMAASPYGAPASSYGYPAVPFAAAAAAALYQRMNPAAYQA--AYQQMQ 280

  Fly   452 YSAAGAT----GVSPAGGQGFADPWNA 474
            |..|...    ...||..||:....||
  Fly   281 YQQAPQAHHHQAPHPAQMQGYPQQLNA 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 Forkhead 311..399 CDD:278670 41/89 (46%)
slp1NP_476730.1 FH 120..205 CDD:214627 40/86 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445453
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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