DRSC/TRiP Functional Genomics Resources

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Protein Alignment bin and foxk1

DIOPT Version :10

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_956196.1 Gene:foxk1 / 334470 ZFINID:ZDB-GENE-030131-6402 Length:639 Species:Danio rerio


Alignment Length:600 Identity:150/600 - (25%)
Similarity:219/600 - (36%) Gaps:165/600 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 QSNSKTPTDLPQDLQYASSST------------STAK-------VQPLQVQLQPLNHQYASTIKY 185
            |.....|..||::..:...||            .|.|       |:||..|:.||          
Zfish   124 QRRGAPPLALPRECTFRFPSTVIKIQFTSLYHKETQKEEAPVSPVRPLYPQISPL---------- 178

  Fly   186 CSNNTILSANDYQLLTSQEQAGQQQPQQLPAQQLQHSPGGGYMSRISTSPSQVISNAHGMPVLNY 250
               ...:..||::.:.|          .||                  ||:..||..:..|....
Zfish   179 ---KITIPDNDFKTMMS----------PLP------------------SPTGTISVPNSCPASPR 212

  Fly   251 SSSSSSPAKSLNGSESSPPSQNHLENKVSGSAVVGTGGSSQQDAPSTPDTTKKSGTRRPEKPALS 315
            .:.||......|.:.....:..:....||......|||.|.:|               ..||..|
Zfish   213 GAGSSGYRYGRNITSDLQLAAEYAAKAVSEQRTEATGGDSPKD---------------ESKPPYS 262

  Fly   316 YINMIGHAIKESPTGKLTLSEIYAYLQKSYEFFRGPYVGWKNSVRHNLSLNECFKKLPKGMGVGK 380
            |..:|..||..:...:||||.|||::.|.|.::|....||:||:|||||||..|.|:|:..  .:
Zfish   263 YAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQ--EE 325

  Fly   381 PGKGNYWTIDENSAHLFEDEGSLRRRPRGY------------RSKIKVKPYAG----HANGYYA- 428
            ||||::|.:|.:|.....::...:||.||.            ||......::|    |::|... 
Zfish   326 PGKGSFWRVDPSSEAKLVEQAFRKRRQRGVSCFRTPFGPLSSRSAPASPTHSGLLSPHSSGLQTP 390

  Fly   429 ---SGYGDA---GMDNGNYYASPAFASYDYSAAGATGVSPAGGQG--FADPWNAHAAHSG----- 480
               |..|..   ..|.|:..||.....|..||.|    ||...|.  .|.|..:.||.|.     
Zfish   391 ECLSREGSPVSHEHDFGSKLASVPEYRYSQSAPG----SPVSAQPVIMAVPSQSSAAISKPVAYM 451

  Fly   481 ----SSSVGVGMGVGPLPQYTNISCLAAGGNVNGSATTPPLAHSALGMAPSASSSSSPLGAAATL 541
                |||...|..:..:.|...::.:..   |..|.::|.      |...:.:|||.|    ..|
Zfish   452 PSIISSSQASGQAIHVVQQAPAVTMVRV---VTTSTSSPN------GYILANTSSSGP----GDL 503

  Fly   542 QSDYAPTASL----------VAAGYSYATSAGSLDNGLRSISLQQLPGLSSIQHAQAQAQAQAHH 596
            ..|  |..:|          :.|..|:..||   :.|.:|.::.|   .|:|.|...|..|| :.
Zfish   504 HGD--PRGALDEMPLVGSRVIQAVGSHIASA---NRGQQSYTVVQ---QSAIHHLPVQTIAQ-NG 559

  Fly   597 HHHQHHASHPSHSHQGHGSMHQNHGTSSTTPP-----PSQSGGSHGIDHSPIDRKPAYLP----- 651
            .|.....|.|:.::.....:......:||:||     ||    |...|.|.||......|     
Zfish   560 KHALPVTSIPTSAYALTNPLQILAAQASTSPPVLVNRPS----SMETDESSIDEPEPKRPKKEED 620

  Fly   652 ---PISPPPMMVALN 663
               |: |.|::||:|
Zfish   621 CVAPV-PQPVIVAMN 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 FH_FOX 312..391 CDD:469596 35/78 (45%)
foxk1NP_956196.1 FHA_FOXK1 52..154 CDD:438774 6/29 (21%)
FH_FOXK1 256..356 CDD:410828 42/101 (42%)

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