DRSC/TRiP Functional Genomics Resources

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Protein Alignment bin and fd3F

DIOPT Version :10

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_001356931.1 Gene:fd3F / 31336 FlyBaseID:FBgn0264954 Length:764 Species:Drosophila melanogaster


Alignment Length:217 Identity:42/217 - (19%)
Similarity:76/217 - (35%) Gaps:66/217 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 WDAIQWIFTHITRSGPED-----------WLNKHA--DFS------KVFLAGDSAGANIAHHMAI 174
            ||..:.||:.:::....|           |:....  |:|      :.|:.........||....
  Fly   147 WDLGEVIFSDVSKFNSFDKDSMIANFFPKWIIMECAIDYSLNQEQFQSFIGSIEYYKKCAHFYGS 211

  Fly   175 RVDKEK-LPPEN-FKISGMI-------LFHPYFLSK-ALIEEMEVEAMRYYERLWRIASPDSGNG 229
            .:.:|| |..|: .||....       :.||.||.| ..||.|.:..:..::..:...|.|   |
  Fly   212 SMPEEKRLDDEDTIKIFSKFWDWHYSEIAHPIFLKKFDKIEYMAIFLLLLFDSAYMNISDD---G 273

  Fly   230 VEDPWINVVGSDLTGLGCRRVLVMVAGNDVLARGGWSYVAELEKSGW-----IGKVKVMETKEEG 289
            |:              .|:.:      ..|:.|....|.::...|.:     :..|:::| |.||
  Fly   274 VK--------------LCQNI------RKVILRELQGYQSDKNCSRYRLAETVDTVRLLE-KAEG 317

  Fly   290 HV--------FHLRDPDSENAR 303
            .:        ||..:.|.::.:
  Fly   318 KLQEESVLCEFHNLEIDEDHKK 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 FH_FOX 312..391 CDD:469596
fd3FNP_001356931.1 Forkhead 401..473 CDD:459732
Blue background indicates that the domain is not in the aligned region.

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