DRSC/TRiP Functional Genomics Resources

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Protein Alignment bin and foxb1a

DIOPT Version :10

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_571360.1 Gene:foxb1a / 30542 ZFINID:ZDB-GENE-990616-47 Length:297 Species:Danio rerio


Alignment Length:310 Identity:76/310 - (24%)
Similarity:115/310 - (37%) Gaps:96/310 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   306 TRRPEKPALSYINMIGHAIKESPTGKLTLSEIYAYLQKSYEFFRGPYVGWKNSVRHNLSLNECFK 370
            |...:||..|||::...||:..|...|.|||||.::...:.::|.....|:||:|||||.|:||.
Zfish     8 TYSDQKPPYSYISLTAMAIQSCPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNLSFNDCFI 72

  Fly   371 KLPKGMGVGKPGKGNYWTIDENSAHLFEDEGSLRRRPR---------------------GYRSKI 414
            |:|:  ...:||||::|.:..:...:||:...||||.|                     ...:|:
Zfish    73 KIPR--RPDQPGKGSFWALHPSCGDMFENGSFLRRRKRFKVMTSEHLAPSKPSDAAHYLQQHAKL 135

  Fly   415 KVKPYAGH---------------------------ANGYYASG---------------------Y 431
            ::.....|                           |..|...|                     |
Zfish   136 RLSALGTHLPQMSSYNLGVSQPSTFKHPFAIENIIAREYKVPGGLAFSTGYPLHNQLTTAWPHMY 200

  Fly   432 GDAGMDNGNYYASP-AFASYDYSAAGATGVSPAGGQGFADPWNAHAAHSGSSSVGVGMGVGPLPQ 495
            ..:.||:    |:| :..|.||||.|....|              ..|.|.:...:.:.:.|.|.
Zfish   201 STSMMDS----AAPISMTSSDYSAYGVPIKS--------------LCHGGQTLPAIPVPIKPTPA 247

  Fly   496 YT--NISCLAAGGNVNGSATTPPLAHSALGMAPSASSSSSPLGAAATLQS 543
            ..  :|....:....:.|.|:|..|.|    ..|.::.|..|...|||||
Zfish   248 ALPHHIPAFLSNSPQSLSPTSPQTATS----QSSPATPSETLTGPATLQS 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 FH_FOX 312..391 CDD:469596 32/78 (41%)
foxb1aNP_571360.1 FH_FOXB2 1..110 CDD:410817 41/103 (40%)

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