DRSC/TRiP Functional Genomics Resources

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Protein Alignment bin and foxa

DIOPT Version :10

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_571357.2 Gene:foxa / 30539 ZFINID:ZDB-GENE-990415-76 Length:355 Species:Danio rerio


Alignment Length:233 Identity:65/233 - (27%)
Similarity:104/233 - (44%) Gaps:56/233 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 YASTIKYCSNNTILSANDYQLLTSQEQAGQQQPQQLPAQQLQHSPGGGYMSRISTSPSQVISNAH 243
            |:|.:.|.|::..|....|.                |.:....|.|....|..:.:|.::.|.|.
Zfish    17 YSSEMYYGSDSLPLGPRGYS----------------PPEHHYQSYGVQCDSAPAVNPGRLGSPAG 65

  Fly   244 GMPVLNYSSSSSSPAKSLNGSESSPPSQNHLENKVSGSAVVGTGGSSQQDAPSTPDTTKKSGTRR 308
            .:|..|       |.|:.....||.|....|                            ||..||
Zfish    66 LLPPAN-------PPKAYAEINSSEPEFQEL----------------------------KSVYRR 95

  Fly   309 P---EKPALSYINMIGHAIKESPTGKLTLSEIYAYLQKSYEFFRGPYVGWKNSVRHNLSLNECFK 370
            .   .||..|||::|..||::||..:|||:|||.::::.:.::|.....|:||:||:||.|:||.
Zfish    96 TLSHAKPPYSYISLICMAIQQSPAKRLTLNEIYDWIRQLFPYYRQNQQRWQNSIRHSLSFNDCFV 160

  Fly   371 KLPKGMGVGKPGKGNYWTIDENSAHLFEDEGSLRRRPR 408
            ::|:  ....||||:||.:..:|.::||:...:||:.|
Zfish   161 RVPR--SPDSPGKGSYWALHPDSGNMFENGCYMRRQKR 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 FH_FOX 312..391 CDD:469596 33/78 (42%)
foxaNP_571357.2 FH_FOX 101..197 CDD:469596 40/98 (41%)

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