DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bin and foxd2

DIOPT Version :9

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_571346.2 Gene:foxd2 / 30525 ZFINID:ZDB-GENE-980605-6 Length:369 Species:Danio rerio


Alignment Length:353 Identity:103/353 - (29%)
Similarity:151/353 - (42%) Gaps:84/353 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   273 HLEN-------KVSGSAVVGTGGSS---------QQDAPSTPDTT-KKSGTRRPEKPALSYINMI 320
            ||:|       :.:|...:..|.||         |:|...|...| .|.|.....||..|||.:|
Zfish    40 HLDNDSDDNLSQNAGEGAISPGQSSLDCPADRVGQRDDSRTGALTGDKPGKNALVKPPYSYIALI 104

  Fly   321 GHAIKESPTGKLTLSEIYAYLQKSYEFFRGPYVGWKNSVRHNLSLNECFKKLPKGMGVGKPGKGN 385
            ..||.:||..:||||||..::...:.::|..:..|:||:|||||||:||.|:|:  ..|.|||||
Zfish   105 TMAILQSPKKRLTLSEICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPR--EPGNPGKGN 167

  Fly   386 YWTIDENSAHLFEDEGSLRRRPRGYRSKIK--VKPYAGHANGYYASGYGDAGMDNG----NYYAS 444
            |||:|..||.:|::...||||.|..|.:..  ::...|...|:   |||..|.:.|    |::|.
Zfish   168 YWTLDPESADMFDNGSFLRRRKRFKRHQTNEILREAGGFLPGF---GYGPYGYNYGLQLQNFHAH 229

  Fly   445 PAFASYDYSAAGATGVSPAGGQGFADPW-NAHAA-----------HSGSSSVGVGM--------- 488
            ..:..:.              .|.|.|: |.|.|           ||..|.:|..:         
Zfish   230 HPYHPHH--------------PGSAFPFQNTHCALPTPSSIFSTPHSLPSFLGTELRKPFYPQLS 280

  Fly   489 ----GVGPLPQYTNISCLAAG--------GNVNGSATTP--PLAHSALGMAPSASSSSSPLGAAA 539
                |:.||...||      |        .|:.|:|::|  |......|.| ...:..:|..|:|
Zfish   281 PTLPGLAPLKTDTN------GPSRPSFSIDNIIGAASSPASPYTTQPAGQA-QILAMLTPTLASA 338

  Fly   540 TLQSDYAPTASLVAAGYSYATSAGSLDN 567
            |..........|.....::::...||:|
Zfish   339 TNHLSITQETMLQPGTQTFSSKTSSLNN 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 Forkhead 311..399 CDD:278670 44/87 (51%)
foxd2NP_571346.2 Forkhead 95..181 CDD:278670 44/87 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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