DRSC/TRiP Functional Genomics Resources

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Protein Alignment bin and foxd2

DIOPT Version :10

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_571346.2 Gene:foxd2 / 30525 ZFINID:ZDB-GENE-980605-6 Length:369 Species:Danio rerio


Alignment Length:353 Identity:103/353 - (29%)
Similarity:151/353 - (42%) Gaps:84/353 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   273 HLEN-------KVSGSAVVGTGGSS---------QQDAPSTPDTT-KKSGTRRPEKPALSYINMI 320
            ||:|       :.:|...:..|.||         |:|...|...| .|.|.....||..|||.:|
Zfish    40 HLDNDSDDNLSQNAGEGAISPGQSSLDCPADRVGQRDDSRTGALTGDKPGKNALVKPPYSYIALI 104

  Fly   321 GHAIKESPTGKLTLSEIYAYLQKSYEFFRGPYVGWKNSVRHNLSLNECFKKLPKGMGVGKPGKGN 385
            ..||.:||..:||||||..::...:.::|..:..|:||:|||||||:||.|:|:  ..|.|||||
Zfish   105 TMAILQSPKKRLTLSEICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPR--EPGNPGKGN 167

  Fly   386 YWTIDENSAHLFEDEGSLRRRPRGYRSKIK--VKPYAGHANGYYASGYGDAGMDNG----NYYAS 444
            |||:|..||.:|::...||||.|..|.:..  ::...|...|:   |||..|.:.|    |::|.
Zfish   168 YWTLDPESADMFDNGSFLRRRKRFKRHQTNEILREAGGFLPGF---GYGPYGYNYGLQLQNFHAH 229

  Fly   445 PAFASYDYSAAGATGVSPAGGQGFADPW-NAHAA-----------HSGSSSVGVGM--------- 488
            ..:..:.              .|.|.|: |.|.|           ||..|.:|..:         
Zfish   230 HPYHPHH--------------PGSAFPFQNTHCALPTPSSIFSTPHSLPSFLGTELRKPFYPQLS 280

  Fly   489 ----GVGPLPQYTNISCLAAG--------GNVNGSATTP--PLAHSALGMAPSASSSSSPLGAAA 539
                |:.||...||      |        .|:.|:|::|  |......|.| ...:..:|..|:|
Zfish   281 PTLPGLAPLKTDTN------GPSRPSFSIDNIIGAASSPASPYTTQPAGQA-QILAMLTPTLASA 338

  Fly   540 TLQSDYAPTASLVAAGYSYATSAGSLDN 567
            |..........|.....::::...||:|
Zfish   339 TNHLSITQETMLQPGTQTFSSKTSSLNN 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 FH_FOX 312..391 CDD:469596 39/78 (50%)
foxd2NP_571346.2 FH_FOXD1_D2-like 95..193 CDD:410820 49/99 (49%)

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