DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bin and fkh2

DIOPT Version :9

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_596764.1 Gene:fkh2 / 2539703 PomBaseID:SPBC16G5.15c Length:642 Species:Schizosaccharomyces pombe


Alignment Length:650 Identity:142/650 - (21%)
Similarity:222/650 - (34%) Gaps:170/650 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 ESPTELI-DEKPNIGYMELKHYMDATPTATPVSAAQHYSL-----SALHSMGTPPASSSPIPPYG 126
            ||.:|.| |::.....::.|..||       |...::..|     |.:..:..||.....:..| 
pombe     7 ESKSEHISDDEERKEQLDYKKQMD-------VDTDRNIVLNGRLESQIAKLSVPPHEMRVVDDY- 63

  Fly   127 VLMTAHSAGSASPQSNSKTPTDLPQDLQ-YA--SSSTSTAKVQPLQVQL--QPLNHQYASTIKYC 186
                          ||||.......::| ||  :.||.|..|:.:::.|  :|.|....      
pombe    64 --------------SNSKNAERHSGEIQAYAKFAGSTWTYYVKKIRIILGREPANPSPK------ 108

  Fly   187 SNNTILSANDYQLLTSQEQAGQQQPQQLPAQQLQHSPGGGYMSRISTSPSQVISNAHGMPVLNYS 251
            ..|..|...|                                  ::..||:|:|..|.  |:.|.
pombe   109 GKNEDLEVID----------------------------------MNFGPSKVVSRKHA--VVEYD 137

  Fly   252 SSSSSPAKSLNGSESSPPSQNHLENKVSGSAVVGTGGS--------------SQQDAPSTPDTTK 302
            ....:...|:.|...........:|   |..|..|.||              :..:...|.::|.
pombe   138 LDDQTWNCSVYGRNGIKVDGKLFKN---GETVKLTSGSILEVAGLQMMFVLPNAAEQKQTDESTI 199

  Fly   303 KSGTRRPE---------------KPALSYINMIGHAIKESPTGKLTLSEIYAYLQKSYEFFRGPY 352
            |....:.|               ||..||..||..||..|....:|||.||:::...|.::|...
pombe   200 KEDAIKSEISAAVNDAAEYGDNKKPPYSYSVMIAQAILSSSECMMTLSNIYSWISTHYPYYRTTK 264

  Fly   353 VGWKNSVRHNLSLNECFKKLPKGMGVGKPGKGNYWTIDENSAHLFEDE--GSLRRRPRGYRSKIK 415
            .||:||:|||||||:.|:|:|:..  |:.|||..|:|...    |.:|  ...|:.|| .||...
pombe   265 SGWQNSIRHNLSLNKAFRKVPRKS--GEQGKGMKWSIVPE----FREEFIAKTRKTPR-KRSPSS 322

  Fly   416 VKPYAGHANGYYASGYGDAGM---------DNGNYYASPAFASYDYSAAGATGVSPAGGQGFADP 471
            ..|......      .|...:         |.....|.||     .|...|...:|:..:....|
pombe   323 PVPLLAKKR------EGSPSLPIPILPKMKDTSIPAAEPA-----SSTTSARDQTPSTPKDVGSP 376

  Fly   472 WNAHAAHSGSSSVGVGMGVGPLPQYTNISCLAAGGNVNGSATTPPLAHSALGMAPSASSS----- 531
            ..|.     :|:....|.....|.:..:|.:.:             .|.....|.|||.:     
pombe   377 STAE-----TSAEEKQMETYKTPTHAALSDIIS-------------THDYALDANSASQTKKAAF 423

  Fly   532 SSPLGAAATLQSDYAPTASLVAAGYSYA-TSAGSLDNGLRSISLQQLPGLSSIQHAQAQAQA--Q 593
            .||:|::....|..||....||....:. ...||.|    :||..:.|..|.:.::|.|..:  :
pombe   424 GSPIGSSTYPTSSPAPFWKYVAVPNPHDWPQVGSYD----TISPYRNPVNSHLIYSQIQQSSPKK 484

  Fly   594 AHHHHHQHHASHPSHSHQGHGSMHQ---NHGTSSTTPPPSQSGGSHGIDHSPID-RKPAYLPPIS 654
            .....|........:..:|..|..:   |...||.:..|:.:..:.....||:. ::.:.||..|
pombe   485 IDEQLHDLQGVDLVNGFEGISSWRESMVNKLRSSVSDSPTMNLANSNSKSSPVAVQRVSTLPQAS 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 Forkhead 311..399 CDD:278670 37/87 (43%)
fkh2NP_596764.1 COG5025 6..622 CDD:227358 141/649 (22%)
FHA 81..185 CDD:238017 25/148 (17%)
Forkhead 223..308 CDD:278670 38/90 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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