DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bin and Foxg1

DIOPT Version :10

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_036692.1 Gene:Foxg1 / 24370 RGDID:2619 Length:480 Species:Rattus norvegicus


Alignment Length:676 Identity:150/676 - (22%)
Similarity:217/676 - (32%) Gaps:237/676 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIKSEEASDRSVMTMDQLGGYYHDPRAHPPFSHPHAHSHPHQHTHTGHPYRAGNLLTGGNYQAMG 65
            ||.....|..|::........:|....|....||..|.|.|.|.|                    
  Rat    12 MIPKSSFSINSLVPEAVQNDNHHASHGHHNSHHPQHHHHHHHHHH-------------------- 56

  Fly    66 GGESPTELIDEKPNIGYMELKHYMDATPTATPVSAAQHYSLSALHSMGTPPASSSPIPPYGVLMT 130
                                                            .||.:..|.||      
  Rat    57 ------------------------------------------------PPPPAPQPPPP------ 67

  Fly   131 AHSAGSASPQSNSKTPTDLPQDLQYASSSTSTAKVQPLQVQLQPLNHQYASTIKYCSNNTILSAN 195
                    |....:.|...||..|...:..:.....|     |||                    
  Rat    68 --------PPQQQQQPPPAPQPPQARGAPAADDDKGP-----QPL-------------------- 99

  Fly   196 DYQLLTSQEQAGQQQPQQLPAQQLQHSPGGGYMSRISTSPSQVISNAHGMPVLNYSSSSSSPAKS 260
               ||.........:...|.|   :..||||........|.:....|..                
  Rat   100 ---LLPPSAALDGAKADALGA---KGEPGGGPAELAPVGPDEKEKGAGA---------------- 142

  Fly   261 LNGSESSPPSQNHLENKVSGSAVVGTGGSSQQDAPSTPDTTKKSGTRRPEKPALSYINMIGHAIK 325
              |.|         |.|.:|.     ||   :|.....:..||:|  :.|||..||..:|..||:
  Rat   143 --GGE---------EKKGAGE-----GG---KDGEGGKEGDKKNG--KYEKPPFSYNALIMMAIR 186

  Fly   326 ESPTGKLTLSEIYAYLQKSYEFFRGPYVGWKNSVRHNLSLNECFKKLPKGMGVGKPGKGNYWTID 390
            :||..:|||:.||.::.|::.::|....||:||:|||||||:||.|:|:  ....|||||||.:|
  Rat   187 QSPEKRLTLNGIYEFIMKNFPYYRENKQGWQNSIRHNLSLNKCFVKVPR--HYDDPGKGNYWMLD 249

  Fly   391 ENSAHLF--EDEGSLRRRPRGYRSKIKVKPYAGHANGYYASGYGDAGMDNGN--YYASPAFASYD 451
            .:|..:|  ...|.||||....|:|:..|      .|...:..|...||...  |:....|.|..
  Rat   250 PSSDDVFIGGTTGKLRRRSTTSRAKLAFK------RGARLTSTGLTFMDRAGSLYWPMSPFLSLH 308

  Fly   452 YSAAGATGVSPAGGQGFADPWNAHAAHSGSSSVGVGMGVGPLPQYTNISCLAAGGNVNGSATTPP 516
            :..|.:|       ..:....:|:.:|             |:| |:::....:.||.:..:|...
  Rat   309 HPRASST-------LSYNGTTSAYPSH-------------PMP-YSSVLTQNSLGNNHSFSTANG 352

  Fly   517 LAHSAL--GMAPSASSSSSPLGAAATLQSDYAPTASLVAAGYSYATSAGSLDNGLRSISLQQLPG 579
            |:...|  |..|.|:...:....||::     |....|....:|:         |...|:..|.|
  Rat   353 LSVDRLVNGEIPYATHHLTAAALAASV-----PCGLSVPCSGTYS---------LNPCSVNLLAG 403

  Fly   580 LSSIQHAQAQAQAQAHHHHHQHHASHPSHSHQGHGSMHQNHGTSSTTPPPSQSGGSHGIDHSPID 644
            .:|               :...|..|||.:.|...||.....:|||:|                 
  Rat   404 QTS---------------YFFPHVPHPSMTSQTSTSMSARAASSSTSP----------------- 436

  Fly   645 RKPAYLP-----PISPPPMMVALNGG 665
            :.|:.||     | |.|.....|:||
  Rat   437 QAPSTLPCESLRP-SLPSFTTGLSGG 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 FH_FOX 312..391 CDD:469596 37/78 (47%)
Foxg1NP_036692.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 31..172 44/290 (15%)
FH_FOXG 172..250 CDD:410795 38/79 (48%)
COG5025 <175..>347 CDD:227358 63/200 (32%)
Required for interaction with TLE6. /evidence=ECO:0000250|UniProtKB:Q60987 240..335 32/121 (26%)
Interaction with KDM5B. /evidence=ECO:0000250 374..397 6/36 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 418..446 10/44 (23%)

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