DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bin and fkh-10

DIOPT Version :10

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_492676.2 Gene:fkh-10 / 182874 WormBaseID:WBGene00001442 Length:194 Species:Caenorhabditis elegans


Alignment Length:166 Identity:60/166 - (36%)
Similarity:86/166 - (51%) Gaps:18/166 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   295 PSTPDTTKKSGTR-RPEKPALSYINMIGHAIKESPTGKLTLSEIYAYLQKSYEFFRGPYVGWKNS 358
            |.:.||:..|.|. :..||..|||.:|..||..||..|:.|:|:|.::...|.:||....||:||
 Worm    25 PLSFDTSIMSPTECQQPKPQHSYIGLIAMAILSSPQKKMVLAEVYEWIMNEYPYFRSRGAGWRNS 89

  Fly   359 VRHNLSLNECFKKLPKGMGVGKPGKGNYWTIDENSAHLFEDEGSLRRRPRGYRSKIKVKPYAG-- 421
            :|||||||:||.|    .|....|||:||.:.......|| .|..|||    |::.||:.:.|  
 Worm    90 IRHNLSLNDCFVK----AGRAANGKGHYWAVHPACVKDFE-RGDFRRR----RAQRKVRRHMGLQ 145

  Fly   422 HANGYYASGYGDAGMDNGNYYASPAF--ASYDYSAA 455
            ..:|..:...|..|.|.    :.|.|  |.::::.|
 Worm   146 VEDGDSSDEEGSPGSDP----SPPIFPTALWNFNCA 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 FH_FOX 312..391 CDD:469596 36/78 (46%)
fkh-10NP_492676.2 FH_FOXQ2-like 42..129 CDD:410809 40/91 (44%)

Return to query results.
Submit another query.