DRSC/TRiP Functional Genomics Resources

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Protein Alignment bin and fkh-6

DIOPT Version :9

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_494775.1 Gene:fkh-6 / 181907 WormBaseID:WBGene00001438 Length:323 Species:Caenorhabditis elegans


Alignment Length:302 Identity:81/302 - (26%)
Similarity:121/302 - (40%) Gaps:58/302 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   310 EKPALSYINMIGHAIKESPTGKLTLSEIYAYLQKSYEFFRGPYV----GWKNSVRHNLSLNECF- 369
            :||..||:.:|..||..||..::||::||.:::..:.::|....    ||:||:|||||||:|| 
 Worm    20 DKPPYSYVALIAMAIDASPDKRMTLNQIYKFIEAKFPYYRDADAKRKQGWQNSIRHNLSLNDCFV 84

  Fly   370 KKLPKGMGVGKPGKGNYWTIDENSAHLFEDEGSLRRRPRGYRSKIKVKPYA----GHANGYYASG 430
            ||...|.......|||||.:..::|..| |.|:.:||        :||...    |:||....:.
 Worm    85 KKARDGQSCANDRKGNYWQMVADNAPQF-DNGNFKRR--------RVKRLGIGKMGYANTTETTE 140

  Fly   431 YG-----DAGMDNG-----NYYASPAFASYDYSAAGATGVSPAGGQGFADPWNAHAAHSGSSSVG 485
            .|     .....||     |......|..:.:....:...|....|     .|..::.|.|....
 Worm   141 TGTILQQQLPFFNGLKWPQNIQTMDPFQFFKFQYPNSITDSANTSQ-----INNSSSSSSSFDTS 200

  Fly   486 VGMGVGPLPQY---TNISCLAAGGNVNGSATTPPLAHSALGMAPSASSSSSPLGAAATLQSDYAP 547
            :.....|:|..   ||:.          :.:.||...|.:.:.||.:.....|       .|..|
 Worm   201 IYTSAFPIPTSHFDTNLV----------APSQPPPVVSDVEVVPSDTVKEEVL-------VDMKP 248

  Fly   548 TASLVAAGYSYATSAGSLD-NGLRSISLQQLPGLSSIQHAQA 588
                :..|.|..|...||. ...|||..|||...:|..:..|
 Worm   249 ----LIPGISSTTFLTSLQMTDPRSIEQQQLLSTASNMYPNA 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 Forkhead 311..399 CDD:278670 37/92 (40%)
fkh-6NP_494775.1 FH 21..116 CDD:214627 38/95 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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