DRSC/TRiP Functional Genomics Resources

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Protein Alignment bin and fkh-2

DIOPT Version :10

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_508644.1 Gene:fkh-2 / 180663 WormBaseID:WBGene00001434 Length:270 Species:Caenorhabditis elegans


Alignment Length:260 Identity:83/260 - (31%)
Similarity:125/260 - (48%) Gaps:51/260 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 ISTSPSQVISNAHGMPVLNYSSSSSSPAKSLNGSESSPPSQNH---LENKVSGSAVVGTGGSSQQ 292
            |||.|.          :...|:..|.|:.|::.:::......|   ::::.|.|.:     |...
 Worm    25 ISTQPC----------IKQESTDISDPSTSIDTTDTMSTDYLHDESIDDERSESTL-----SKDS 74

  Fly   293 DAPSTPDTTKKSGTRRPEKPALSYINMIGHAIKESPTGKLTLSEIYAYLQKSYEFFRGPYVGWKN 357
            .:||:.::.:|:.:...:||..||..:|..|||:||..:|||:.||.|:..:|.|:|....||:|
 Worm    75 KSPSSSNSEEKTPSSPNDKPPFSYNALIMMAIKDSPEKRLTLAGIYEYIVTNYPFYRDNKQGWQN 139

  Fly   358 SVRHNLSLNECFKKLPKGMGVGKPGKGNYWTIDENSAHLFEDE-------GSLRRRPRGYRSKIK 415
            |:|||||||:||.|:|:..  ..|||||||.:|..:    |||       |.|||||... |:.:
 Worm   140 SIRHNLSLNKCFVKVPRNF--DDPGKGNYWMLDATA----EDEVFIGGATGKLRRRPSSL-SRAR 197

  Fly   416 VKPYAGHANGYYASGYGDAGMDNGNYYA--SPAFASYDYSAAGATGV-------SPAGGQGFADP 471
            :..|         ..||.|..:...|::  .||...:.|..| ..|.       .||..|.||.|
 Worm   198 MDAY---------KQYGAAAANLFPYFSPGMPALPRHPYLTA-PNGFLPRQMMPIPAMPQVFAQP 252

  Fly   472  471
             Worm   253  252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 FH_FOX 312..391 CDD:469596 40/78 (51%)
fkh-2NP_508644.1 FH_FOXG 93..171 CDD:410795 41/79 (52%)

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