DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bin and Foxk1

DIOPT Version :9

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_951031.2 Gene:Foxk1 / 17425 MGIID:1347488 Length:719 Species:Mus musculus


Alignment Length:590 Identity:134/590 - (22%)
Similarity:201/590 - (34%) Gaps:198/590 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 LPQDLQYASSSTSTAKVQPLQVQLQPLNHQYASTIKYCSNNTILSANDYQLLTSQEQAGQQQPQQ 213
            |||...:...||:      :::|...|.|:                                 ::
Mouse   170 LPQQCTFRFPSTA------IKIQFTSLYHK---------------------------------EE 195

  Fly   214 LPAQQLQ-----------HSPGGGYMSRISTSPSQVISNAHGMPVLNYSSSSSSPAKSLNGSESS 267
            .||..|:           |.|.....|.:|..||         |....|..:|.|| |..|:.||
Mouse   196 APASPLRPLYPQISPLKIHIPEPDLRSLVSPIPS---------PTGTISVPNSCPA-SPRGAGSS 250

  Fly   268 PPSQNHLENKVSG---SAVVGTGGSSQQDAPSTPDTTKKSGTRRPEKPALSYINMIGHAIKESPT 329
              |...::|..|.   :|......:|:|.|    |.:.....:...||..||..:|..||..:..
Mouse   251 --SYRFVQNVTSDLQLAAEFAAKAASEQQA----DASGGDSPKDESKPPYSYAQLIVQAISSAQD 309

  Fly   330 GKLTLSEIYAYLQKSYEFFRGPYVGWKNSVRHNLSLNECFKKLPKGMGVGKPGKGNYWTIDENSA 394
            .:||||.|||::.|.|.::|....||:||:|||||||..|.|:|:..  .:||||::|.||..|.
Mouse   310 RQLTLSGIYAHITKHYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQ--EEPGKGSFWRIDPASE 372

  Fly   395 HLFEDEGSLRRRPRG---YRSKIKVKPYAGHANGYYASGYGDAGM-------------------- 436
            ....::...:||.||   :|:     |:...::....:.....|:                    
Mouse   373 AKLVEQAFRKRRQRGVSCFRT-----PFGPLSSRSAPASPTHPGLMSPRSSGLQTPECLSREGSP 432

  Fly   437 -----DNGNYYASPAFASYDYSAAGATGVSPAGGQGFADPWNAHAAHSGSSSVGVGMGVGPLPQY 496
                 |.|:..||.....|..||.|    ||...|                  .|.|.|.|.|  
Mouse   433 IPHDPDLGSKLASVPEYRYSQSAPG----SPVSAQ------------------PVIMAVPPRP-- 473

  Fly   497 TNISCLAAGGNVNGSATTPPLAHSALGMAPSASSSSSPLGAAATLQSDYAPTASLV--------- 552
                         .:....|:|:    |..|..:|..|.|.|..:... |||.::|         
Mouse   474 -------------SNLVAKPVAY----MPASIVTSQQPSGHAIHVVQQ-APTVTMVRVVTTSANS 520

  Fly   553 AAGYSYAT---------SAGS--LDNGLRSISLQQ--------LPGLSSIQHAQAQAQAQAHHHH 598
            |.||..|:         :||:  ||.|..:..|::        :|..|.:....|...|.....|
Mouse   521 ANGYILASQGSTGTSHDTAGTAVLDLGNEARGLEEKPTIAFATIPAASRVIQTVASQMAPGVPGH 585

  Fly   599 -------------HQHHASHPSHSHQGHGSMHQNHGTSSTTPPPSQSGGSHGIDHSPIDRKPAYL 650
                         .|||....:.:..|          ....|..|.:|.::.:. ||:....|..
Mouse   586 TVTILQPATPVTIGQHHLPVRAVTQNG----------KHAVPTNSLTGNAYALS-SPLQLLAAQA 639

  Fly   651 PPISP 655
            ...:|
Mouse   640 SSSTP 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 Forkhead 311..399 CDD:278670 39/87 (45%)
Foxk1NP_951031.2 Interaction with SIN3A and SIN3B. /evidence=ECO:0000269|PubMed:10620510, ECO:0000269|PubMed:22476904 2..40
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 35..67
Required for interaction with FOXO4 and MEF2C. /evidence=ECO:0000269|PubMed:22956541 81..406 79/297 (27%)
FHA <88..190 CDD:224630 6/25 (24%)
FHA 96..189 CDD:238017 6/24 (25%)
Forkhead 291..377 CDD:278670 39/87 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 399..443 3/43 (7%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 665..719
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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