DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bin and Foxd2

DIOPT Version :9

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_032619.1 Gene:Foxd2 / 17301 MGIID:1347471 Length:492 Species:Mus musculus


Alignment Length:480 Identity:131/480 - (27%)
Similarity:182/480 - (37%) Gaps:106/480 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 GGGYMSRIS--TSPSQVISNAHGMPVLNYSSSSSSPAKSLNGSESSPPSQNHLENKVSGSAVVGT 286
            |||.::..|  .:|..|:.:.|..|.....:..:...:...|.....|.........:.:...|.
Mouse    35 GGGELTARSGPRAPRDVLPHGHEPPPEEAEADVAEDEEESGGCSDCEPRALAPRGAAAAAGSPGP 99

  Fly   287 GGSSQQDA----PSTPDTTKKSGTRRP-EKPALSYINMIGHAIKESPTGKLTLSEIYAYLQKSYE 346
            |..:.:.|    |.....:..:.||.| .||..|||.:|..||.:||..:||||||..::...:.
Mouse   100 GVQAARGATGPGPGPGPPSGGAATRSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFP 164

  Fly   347 FFRGPYVGWKNSVRHNLSLNECFKKLPKGMGVGKPGKGNYWTIDENSAHLFEDEGSLRRRPRGYR 411
            ::|..:..|:||:|||||||:||.|:|:  ..|.||||||||:|..||.:|::...||||.|..|
Mouse   165 YYREKFPAWQNSIRHNLSLNDCFVKIPR--EPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKR 227

  Fly   412 SKIKVKPYA---GHANGYYASGYGDAGMDNGNYYAS-PAFASYDYS---AAGATGVSPAGGQGFA 469
            ..:. .|:.   .|.......|...|| |.|.:.:| .|:.:|.|.   |..|.|..|.|.....
Mouse   228 QPLP-PPHPHPHPHPELLLRGGAAAAG-DPGAFLSSFAAYGAYGYGYGLALPAYGAPPPGPAPHP 290

  Fly   470 DPWNAHA-AHSGSS----SVGVGMGVGPLPQYTNISCLAAGGNVNGSATTPPLAHSALGMAPSAS 529
            .| :.|| |.:.::    ||..|....|.|.....|..|:             |.||...||:..
Mouse   291 HP-HPHAFAFAATAPCQLSVPPGRAAAPPPGPPTASVFAS-------------AASAPAPAPAPG 341

  Fly   530 SSSSPLGAAATLQSD-------YAPTASLVAAGYSYATSAGSLDNGLRS----------ISLQQL 577
            |..||.|..|.|.::       |..:.|..|||.:.:.|...|..||::          ....|.
Mouse   342 SGPSPAGLPAFLGAELGCAKAFYPASLSPPAAGTAASLSTALLRQGLKTDAGGGAGGGGAGTGQR 406

  Fly   578 PGLSSIQHAQAQAQAQAHHHHHQHHASHPSHSHQGHGSMHQNHGTSSTTPPPSQSGGSHGIDHSP 642
            |.. ||.|.                               ..||.....||.|..|         
Mouse   407 PSF-SIDHI-------------------------------MGHGGGGAAPPGSGDG--------- 430

  Fly   643 IDRKPAYLPPISPPPMMVALNGGGG 667
                       ||.....|..|.||
Mouse   431 -----------SPGSPFAAAAGPGG 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 Forkhead 311..399 CDD:278670 44/87 (51%)
Foxd2NP_032619.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 13..125 15/89 (17%)
Forkhead 129..215 CDD:278670 44/87 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 309..344 12/47 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 394..441 14/98 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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