DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bin and let-381

DIOPT Version :9

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_491826.1 Gene:let-381 / 172331 WormBaseID:WBGene00002601 Length:362 Species:Caenorhabditis elegans


Alignment Length:383 Identity:114/383 - (29%)
Similarity:172/383 - (44%) Gaps:95/383 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 ISNAHGMPVLNYSSSSSSPAKSLNGSESSPPSQNHL--------ENKVSGSAVVGTGGSSQQDAP 295
            ::||.|...|:    |::|    |.|..:..::|:.        ||             |.:|:.
 Worm    10 LANALGPLKLD----STAP----NNSHRTIKAENYFNEDEEDYNEN-------------SHEDSE 53

  Fly   296 STPDTTKKSGTR---RPEKPALSYINMIGHAIKESPTGKLTLSEIYAYLQKSYEFFRGPYVGWKN 357
            .:.:.:...|.|   |.|||..|||.:|..||.:.|..|.||:|||:|||:::|||||.|.||:|
 Worm    54 DSKEDSDGQGCRSRKRKEKPPFSYIALIAMAISKRPDKKATLAEIYSYLQENFEFFRGEYAGWRN 118

  Fly   358 SVRHNLSLNECFKKLPKGMGVGKPG-KGNYWTIDENSAHLFEDEGSLRRRPRGYRSKIKVKPYAG 421
            |:||||||||||.||||..|....| ||:.|||.::...:.|:.| .|||||||:::.:.     
 Worm   119 SIRHNLSLNECFVKLPKDTGESYRGRKGHKWTISDSCEFMLEENG-FRRRPRGYKARKRT----- 177

  Fly   422 HANGYYAS---GYGDAGMDNGNYYASPAFASYDYSAAGATGVSP-------AGGQGFADPWNAHA 476
            |..|..||   |.|.|..|    |.|   ::.:.:.:|.:.::.       .||:.|....:...
 Worm   178 HFPGVTASNEMGIGGATFD----YPS---STTELTDSGTSSLNTDVKNILLNGGEDFGPSISDQL 235

  Fly   477 AHSGSSSV-----------------GVGMGVGPL---------PQYTNIS---CLAAGGNVNGSA 512
            ..|.:|:|                 |.|....|:         |.|....   |.:....::.|.
 Worm   236 VSSTTSAVLPSLNGPDQSPIYPNYFGYGTAEFPMQWASPTYDWPYYATPHIGLCSSDFPGISPSP 300

  Fly   513 TTPPLAHSALGMAPSASSSSS-----PLGAAATLQSDYAPTASLVAAGYSYATSAGSL 565
            |..|.. |.....|:.:::||     ..|.::.....|..:||.:||    .|:||.:
 Worm   301 TVTPQV-SPYFYPPAITTASSFMDDWRFGVSSAAVGAYDSSASFLAA----ETTAGDV 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 Forkhead 311..399 CDD:278670 49/88 (56%)
let-381NP_491826.1 Forkhead 71..160 CDD:365978 50/88 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158210
Domainoid 1 1.000 106 1.000 Domainoid score I4142
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2973
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto17491
orthoMCL 1 0.900 - - OOG6_108542
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1971
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.550

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