DRSC/TRiP Functional Genomics Resources

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Protein Alignment bin and Foxd3

DIOPT Version :9

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_034555.3 Gene:Foxd3 / 15221 MGIID:1347473 Length:469 Species:Mus musculus


Alignment Length:480 Identity:131/480 - (27%)
Similarity:189/480 - (39%) Gaps:100/480 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 SNNTILSANDYQ----------LLTSQEQAGQQQPQQLPAQQLQHSPGGGYMSRISTSPSQVISN 241
            |..|:|:|.|..          |......||...|...|..:|..:..|   ..:|....|....
Mouse    13 SGQTVLTAEDVDIDVVGEGDDGLEEKDSDAGCDSPAGPPDLRLDEADEG---PPVSAHHGQSQPQ 74

  Fly   242 AHGMPVLNYSSSSSSPAKSLNGSESSPPSQNHLENKVSGSAVVGTGGSSQQDAPSTPDTTKKSGT 306
            |..:|.......:.:.|...:|.:..       |:.|:|..  |.|..|......||:..|.|..
Mouse    75 ALALPTEATGPGNDTGAPEADGCKGG-------EDAVTGGG--GPGAGSGATGGLTPNKPKNSLV 130

  Fly   307 RRPEKPALSYINMIGHAIKESPTGKLTLSEIYAYLQKSYEFFRGPYVGWKNSVRHNLSLNECFKK 371
                ||..|||.:|..||.:||..|||||.|..::...:.::|..:..|:||:|||||||:||.|
Mouse   131 ----KPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVK 191

  Fly   372 LPKGMGVGKPGKGNYWTIDENSAHLFEDEGSLRRRPRGYR---------SKIKVKPYAGHANGYY 427
            :|:  ..|.||||||||:|..|..:|::...||||.|..|         :.:.::.:..::.. .
Mouse   192 IPR--EPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQEHLREQTALMMQSFGAYSLA-A 253

  Fly   428 ASGYGDAGMDNGNYYASPAFASYDYSAAGATGVSPAGGQ-GFADPWNA----------HAAHSGS 481
            |:|.|..|...|.:.|:.| .:|.:.||.|...:.|..| .:|.|..|          .:...|.
Mouse   254 AAGAGPYGRPYGLHPAAAA-GAYSHPAAAAAAAAAAALQYPYALPPVAPVLPPAVPLLPSGELGR 317

  Fly   482 SSVGVGMGVGP--LPQYTNISCLAAGGNVNGSATTPPLAHSALGMAPSAS-------SSSSPLGA 537
            .:...|..:||  ..|...:...||.....|:|.|..|..|.....||.|       .|::|.|:
Mouse   318 KAAAFGSQLGPSLQLQLNTLGAAAAAAGTAGAAGTTSLIKSEPSARPSFSIENIIGAGSAAPGGS 382

  Fly   538 A----------------------------ATLQSDYAPTASLVAA------GYSYATSAGSLDNG 568
            |                            .|:||     |:|:|.      ..:.||.|..|...
Mouse   383 AGGGGSGGGAGGGGGSGGGGGAQSFLRPPGTVQS-----AALMATHQPLSLSRTTATIAPILSVP 442

  Fly   569 LRSISLQQLPGLSSIQHAQAQAQAQ 593
            |....||  |..|:...|.|..||:
Mouse   443 LSGQFLQ--PAASAAAAAAAAVQAK 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 Forkhead 311..399 CDD:278670 43/87 (49%)
Foxd3NP_034555.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..127 26/125 (21%)
Forkhead 131..217 CDD:278670 43/87 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 379..409 3/29 (10%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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