DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bin and Foxf2

DIOPT Version :9

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_034355.2 Gene:Foxf2 / 14238 MGIID:1347479 Length:446 Species:Mus musculus


Alignment Length:475 Identity:171/475 - (36%)
Similarity:220/475 - (46%) Gaps:93/475 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 SQEQAGQQQPQQLPAQQLQH--SPGGGYMSRISTSPSQVISNAHGMPVLNYSSSSSSPAKSLNGS 264
            |.|......|.:.|...|:.  ||..|.:.....||....:       |..:|||||.:.:...|
Mouse     2 STEGGPPPPPPRPPPAPLRRACSPAPGALQAALMSPPPAAT-------LESTSSSSSSSSASCAS 59

  Fly   265 ESSPPSQNHLENKVSGSAVVGTGGSSQQDAPSTPDTTKK--SGTRRPEKPALSYINMIGHAIKES 327
            .||        |.||.||......:|...|.:....|||  ||.||||||..|||.:|..||:.|
Mouse    60 SSS--------NSVSASAGACKSAASSGGAGAGSGGTKKATSGLRRPEKPPYSYIALIVMAIQSS 116

  Fly   328 PTGKLTLSEIYAYLQKSYEFFRGPYVGWKNSVRHNLSLNECFKKLPKGMGVGKPGKGNYWTIDEN 392
            |:.:|||||||.:||..:.||||.|.||||||||||||||||.|||||:  |:||||:|||||..
Mouse   117 PSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPKGL--GRPGKGHYWTIDPA 179

  Fly   393 SAHLFEDEGSLRRRPRGYRSKIK-VKP-YAGHANGYYASGYGDAGMDNG-NYYASPA-------- 446
            |..:|| |||.||||||:|.|.: :|| |....:|.   |:|.:.:..| ::.|.|:        
Mouse   180 SEFMFE-EGSFRRRPRGFRRKCQALKPMYHRVVSGL---GFGASLLPQGFDFQAPPSAPLGCHGQ 240

  Fly   447 --FASYDYSAAG-ATGVSPAGGQGFADPWNAHAAHSGSSSVGVG---MGVGPLPQYTNISCLAAG 505
              :...|...|| .||   ||..|.|.|.:.|..|....|...|   |...|:|........|||
Mouse   241 GGYGGLDMMPAGYDTG---AGAPGHAHPHHLHHHHVPHMSPNPGSTYMASCPVPAGPAGVGAAAG 302

  Fly   506 GNVNGSATTPPLAHSALGMAPSASSS--------------SSPLGAAATLQSDYAPTASLVAAGY 556
            |...|....|..:.|.:..:|:.:|:              ||| ||:..|:...|.|.|     .
Mouse   303 GGGGGGDYGPDSSSSPVPSSPAMASAIECHSPYTSPAAHWSSP-GASPYLKQPPALTPS-----S 361

  Fly   557 SYATSAGSLDNGLRSISLQQLPGLSSIQHAQAQAQAQAHHHHHQHHAS----------------- 604
            :.|.||| |...:.|.||:|     |..|..|:.........:|||::                 
Mouse   362 NPAASAG-LHPSMSSYSLEQ-----SYLHQNAREDLSVGLPRYQHHSTPVCDRKDFVLNFNGISS 420

  Fly   605 -HPSHSHQGHGSMHQNHGTS 623
             |||.|    ||.:.:|..|
Mouse   421 FHPSAS----GSYYHHHHQS 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 Forkhead 311..399 CDD:278670 57/87 (66%)
Foxf2NP_034355.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..97 31/109 (28%)
FH 100..188 CDD:214627 59/90 (66%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..278 7/20 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 304..325 4/20 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 340..371 14/37 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I3958
Isobase 1 0.950 - 0 Normalized mean entropy S2973
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm44221
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR46262
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1971
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.000

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