DRSC/TRiP Functional Genomics Resources

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Protein Alignment bin and Foxc2

DIOPT Version :9

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_038547.2 Gene:Foxc2 / 14234 MGIID:1347481 Length:494 Species:Mus musculus


Alignment Length:491 Identity:132/491 - (26%)
Similarity:185/491 - (37%) Gaps:136/491 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 ISNAHGMPVLNY-SSSSSSPAKSLNGSESSPPS--QNHLENKVSGSAVVGTGGSSQQDAPSTPDT 300
            :|:.:.:.|:.| |..:...|....|..:||..  ..|.|...:|   :|...:.....|:.|  
Mouse     7 VSDPNALGVVPYLSEQNYYRAAGSYGGMASPMGVYSGHPEQYGAG---MGRSYAPYHHQPAAP-- 66

  Fly   301 TKKSGTRRPEKPALSYINMIGHAIKESPTGKLTLSEIYAYLQKSYEFFRGPYVGWKNSVRHNLSL 365
                  :...||..|||.:|..||:.:|..|:||:.||.::...:.|:|....||:||:||||||
Mouse    67 ------KDLVKPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSL 125

  Fly   366 NECFKKLPKGMGVGKPGKGNYWTIDENSAHLFEDEGSLRRR--------PRGYRSKIKVK-PYAG 421
            ||||.|:|:  ...|||||:|||:|.:|.::||:...||||        |:....:..:| |.:.
Mouse   126 NECFVKVPR--DDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVPKDKEERAHLKEPPST 188

  Fly   422 HANGY-----YASGYGDAG-----------------------MDNGNYYASPAFASYDYSAAGAT 458
            .|.|.     .|.|..:|.                       ...|...|||..||         
Mouse   189 TAKGAPTGTPVADGPKEAEKKVVVKSEAASPALPVITKVETLSPEGALQASPRSAS--------- 244

  Fly   459 GVSPAGGQGFADPWNAHAAHSG--SSSVGVGMGVGPLPQYTNISCLAAGGNVNGSATTPPLAHSA 521
             .:|||....:.|.:..||.:|  ..||...|.:...|...::|..||    ......||||...
Mouse   245 -STPAGSPDGSLPEHHAAAPNGLPGFSVETIMTLRTSPPGGDLSPAAA----RAGLVVPPLALPY 304

  Fly   522 LGMAPSASSSSSPLGAAATLQSDYAPTASLVAAGYSYATSAGSLDNGLR-----------SISLQ 575
            ....|:|.:.....|..|.           .:|||..:..|.||..|..           ..:|.
Mouse   305 AAAPPAAYTQPCAQGLEAA-----------GSAGYQCSMRAMSLYTGAERPAHVCVPPALDEALS 358

  Fly   576 QLPG-----LSSIQHAQAQAQA-QAHHHHHQHHASHPSHSHQGHGSMHQNHGTSSTTPPPSQSGG 634
            ..|.     |.::..|..|..| .|..|||||           ||.:|..      .|||:..  
Mouse   359 DHPSGPGSPLGALNLAAGQEGALGASGHHHQH-----------HGHLHPQ------APPPAPQ-- 404

  Fly   635 SHGIDHSPIDRKPAYLPPISPPPMMVA----LNGGG 666
                            ||.:|.|...|    ||.||
Mouse   405 ----------------PPPAPQPATQATSWYLNHGG 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 Forkhead 311..399 CDD:278670 43/87 (49%)
Foxc2NP_038547.2 FH 71..159 CDD:214627 44/89 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 166..213 8/46 (17%)
EBP50_C 167..>257 CDD:286142 17/99 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 233..267 13/43 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 381..422 18/75 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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