DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bin and foxq1a

DIOPT Version :9

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_001230273.1 Gene:foxq1a / 100537750 ZFINID:ZDB-GENE-070424-74 Length:312 Species:Danio rerio


Alignment Length:359 Identity:107/359 - (29%)
Similarity:137/359 - (38%) Gaps:99/359 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 SSSSSSPAKSLNGSESSPPSQNHLENKVSGSAVVGTGGSSQQDAPS-TPDTTKKSGTRRPEKPAL 314
            |...|.||:..:.:|.|.||      .||....:|:.|.....:|: ..||..|..|||| ||..
Zfish    34 SHYDSKPAELCSDAEGSIPS------PVSAEEELGSDGDCVAHSPAPVADTKGKPYTRRP-KPPY 91

  Fly   315 SYINMIGHAIKESPTGKLTLSEIYAYLQKSYEFFRGPYVGWKNSVRHNLSLNECFKKLPKGMGVG 379
            |||.:|..||::|.:|:|||:||..||.|.:.||||.|.||:||||||||||:||.|:.:  ...
Zfish    92 SYIALIAMAIRDSNSGRLTLAEINDYLMKKFPFFRGSYTGWRNSVRHNLSLNDCFLKVLR--DPS 154

  Fly   380 KP-GKGNYWTIDENSAHLFEDEGSLRRRPRGYRSKIKVKPYAGHANGYYASGYGDAGMDNGNYYA 443
            :| ||.|||.::.:|.:.|.| |..|||    |.:|..|                          
Zfish   155 RPWGKDNYWMLNPHSEYTFAD-GVFRRR----RKRISKK-------------------------- 188

  Fly   444 SPAFASYDYSAAGATGVSPAGGQGFADPWNAHAAHSGSSSVGVGMGVGPLPQYTNISCLAAGGNV 508
                          ||..|.|      |...||..|                             
Zfish   189 --------------TGREPEG------PVQTHALDS----------------------------- 204

  Fly   509 NGSATTPPLAHSALGMAPSASSSSSPLGA--AATLQSDYAPTASLVAAGYSYATSAGSLDNGLRS 571
            |.|..|||.:..........|..|.|...  ...|..|..|........|....|.|:|::...|
Zfish   205 NDSIATPPSSGKFTSSFAIESILSRPFRREDRPVLSPDTWPGGVDTVLPYVMLRSYGALEDPSMS 269

  Fly   572 ------ISLQQLPGLSSIQHAQAQAQAQAHHHHH 599
                  .:.|..|...||.|..|...|.|...:|
Zfish   270 RRQRDFFAFQLPPECLSIPHTSAAVPAPATAGYH 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 Forkhead 311..399 CDD:278670 46/88 (52%)
foxq1aNP_001230273.1 FH 88..177 CDD:214627 47/91 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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