DRSC/TRiP Functional Genomics Resources

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Protein Alignment bin and foxl2

DIOPT Version :10

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:XP_004917868.1 Gene:foxl2 / 100486124 XenbaseID:XB-GENE-486612 Length:326 Species:Xenopus tropicalis


Alignment Length:433 Identity:116/433 - (26%)
Similarity:165/433 - (38%) Gaps:143/433 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 RISTSPSQVISNAHGMPVLNYSSSSSSPAKSLNGSESSPPSQNHLENKVSGSAVVGTGGS--SQQ 292
            |.|.:|:...|  .|...||..|...:..:|        |.|        |:..:.|..|  :::
 Frog     2 RSSCAPTHYCS--PGCYCLNQGSDRMASFQS--------PEQ--------GTVALMTHNSNGNKE 48

  Fly   293 DAPSTPDTTKKSGTRRP---EKPALSYINMIGHAIKESPTGKLTLSEIYAYLQKSYEFFRGPYVG 354
            ...|..|...:.|..:|   :||..||:.:|..||:||...:||||.||.|:...:.|:.....|
 Frog    49 AERSKEDLLPEKGQEKPDPSQKPPYSYVALIAMAIRESAEKRLTLSAIYQYIISKFPFYEKNKKG 113

  Fly   355 WKNSVRHNLSLNECFKKLPKGMGVGKPGKGNYWTIDENSAHLFEDEGSLRRRPRGYRSKIKVKPY 419
            |:||:||||||||||.|:|:..|..:  ||||||:|.....:|| :|:.|||   .|.|...:|.
 Frog   114 WQNSIRHNLSLNECFIKVPREGGGER--KGNYWTLDPACEDMFE-KGNYRRR---RRMKRPFRPP 172

  Fly   420 AGHANGYYASGYGDAGMDNGNYYASPAFASYDYSAAGATGVSPAGGQGFADPWNAHAAHSGSSSV 484
            ..|    :.:|......|...|.:.|.:....:               ..:.|            
 Frog   173 PTH----FQAGKSLFSSDTYGYLSPPKYLQSTF---------------MNNSW------------ 206

  Fly   485 GVGMGVGPLPQ------YTNISCLAAGGNVNGSATTPPLAHSALGMAPSASSSSSPLGAAATLQS 543
                   ||.|      ||  ||..|||||:      |:....|    |||||.||.....::  
 Frog   207 -------PLAQPPAPMSYT--SCQMAGGNVS------PVNVKGL----SASSSYSPYSRVQSM-- 250

  Fly   544 DYAPTASLVAAGYSYATSAGSLDNGLRSISLQQLPGLSSIQHAQAQAQAQAHHHH-HQHHASHPS 607
                  ||.:...||        ||:                        :|||| |.|||..  
 Frog   251 ------SLPSMVNSY--------NGM------------------------SHHHHPHAHHAQQ-- 275

  Fly   608 HSHQGHGSMHQNHGTSSTTPPPSQSGGSHGIDHSPIDRKPAYL 650
                          .|..:|.|:.....:|:..: ..|:|:.|
 Frog   276 --------------LSPASPAPAPPAPPNGVQFT-CARQPSDL 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 FH_FOX 312..391 CDD:469596 39/78 (50%)
foxl2XP_004917868.1 FH_FOXL2 70..158 CDD:410802 43/90 (48%)

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