DRSC/TRiP Functional Genomics Resources

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Protein Alignment bin and foxn2a

DIOPT Version :10

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:XP_073776450.1 Gene:foxn2a / 100330010 ZFINID:ZDB-GENE-110810-1 Length:406 Species:Danio rerio


Alignment Length:459 Identity:98/459 - (21%)
Similarity:164/459 - (35%) Gaps:151/459 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 LPAQQLQHSPGGGYMSRISTSPSQVISNAHGMPVLNYSSSSSSPAKSLNGSE---SSPP----SQ 271
            ||..:...||....:.|  :|..:.::|      ||:...:.....:|.|:|   |:.|    ..
Zfish    32 LPEAECAASPMPTSLDR--SSADEELTN------LNWLHENLLQNFTLGGTEAQASAGPLLDIEG 88

  Fly   272 NHLENKVSGSAVVGTGGSSQQDAPSTPDTTKKSGTRRPEKPALSYINMIGHAIKESPTGKLTLSE 336
            ||....:|.:|..|            .|:.|       .||..|:..:|..||::||:..|.:.:
Zfish    89 NHANAIISSAAAHG------------EDSVK-------SKPPFSFSLLIYMAIEQSPSKSLPVKD 134

  Fly   337 IYAYLQKSYEFFRGPYVGWKNSVRHNLSLNECFKKLPKGMGVGKPGKGNYWTID-ENSAHLFEDE 400
            ||.::.:.:.:|.....|||||||||||||:||:|:.|.:|... |||:.|.:| |...:|.:  
Zfish   135 IYGWILEHFPYFSSAPTGWKNSVRHNLSLNKCFRKVEKSLGKVN-GKGSLWCVDPEYRPNLIQ-- 196

  Fly   401 GSLRRRPRGYRSKIKVKPYAGHANGYYASGYGDAGMDNGNYYASPAFASYDYSAAGATGVSPAGG 465
             :|:::                   ::.:.:        ::...|||....:|            
Zfish   197 -ALKKQ-------------------HFPTAH--------SFCTPPAFPPSAFS------------ 221

  Fly   466 QGFADPWNAHAAHSGSSSVGVGMGVGPLPQYTNISCLAAGGNVNGSATTPPLAHSALGMAPSASS 530
                                      |..|.....|.....::: :||...|.:||.|.......
Zfish   222 --------------------------PTRQLFLQGCSLKESDID-AATAMMLLNSAPGHHTDPCD 259

  Fly   531 SSSPLGAAATLQSDYAPTASLVAA----GYSYATSAGSLDNGLRSISLQQLPGLSSIQHAQAQAQ 591
            ..||:..:       .|.:.||::    .::|::|:.|........|......|||:..|..:. 
Zfish   260 PDSPIDLS-------RPDSVLVSSDPKQDHNYSSSSSSFQRCSSRSSSSSSSSLSSLDEAGCET- 316

  Fly   592 AQAHHHHHQHHASHPSHSHQGHGSMHQNHGTSSTTPPPSQSGGSHGIDHSPIDRKPAYLPPISPP 656
            .|||.                                 ..|.|.|..:.|..:|.|. |.|:...
Zfish   317 GQAHR---------------------------------DGSEGFHSEEDSEEERNPR-LMPVHRR 347

  Fly   657 PMMV 660
            |:.|
Zfish   348 PLTV 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 FH_FOX 312..391 CDD:469596 34/79 (43%)
foxn2aXP_073776450.1 None

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