DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bin and foxl1

DIOPT Version :9

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:XP_012817795.1 Gene:foxl1 / 100038263 XenbaseID:XB-GENE-5880620 Length:406 Species:Xenopus tropicalis


Alignment Length:448 Identity:114/448 - (25%)
Similarity:168/448 - (37%) Gaps:129/448 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   228 MSRISTSPSQVISNAHGMPVLNYSSSSSSPAKSLNGSESSPPSQNHLENKVSGSAVVGTGGSSQQ 292
            ||||.:||         :|.|. |....||...|.|:|.:         .|.......|...|:|
 Frog     1 MSRIYSSP---------LPQLG-SDLHRSPLVYLYGAERA---------LVPALGFASTNVISRQ 46

  Fly   293 DAPSTPDTTKKSGTRRPEKPALSYINMIGHAIKESPTGKLTLSEIYAYLQKSYEFFRGPYVGWKN 357
            :.              |:||..|||.:|..|||:||..::||:.||.::...:.|:.....||:|
 Frog    47 EP--------------PQKPPYSYIALIAMAIKDSPDHRVTLNGIYQFIMDRFPFYHDNKQGWQN 97

  Fly   358 SVRHNLSLNECFKKLPKGMGVGKPGKGNYWTIDENSAHLFEDEGSLRRRPRGYRSKIKVKPYAGH 422
            |:|||||||:||.|:|:..  |:||||:|||:|.....:||: |:.|||.|      |.||..  
 Frog    98 SIRHNLSLNDCFIKVPREK--GRPGKGSYWTLDPKCLDMFEN-GNFRRRKR------KPKPIL-- 151

  Fly   423 ANGYYASGYGDAGMDNGNYYASPAFASYDYSAAGATGVSPAGGQGFADPWNAHAAHSGSSSVGVG 487
                         ...|..:.:.| |.|..:.|...|.                           
 Frog   152 -------------CQEGKRHKAEA-AEYRLADAACKGT--------------------------- 175

  Fly   488 MGVGPLPQYTNISCLAAGG-NVNGSATTPPLAHSALGMAPSASSSSSPLGAAATLQ-----SDYA 546
                        :|..||. ..|||...|      ||..|:::......|..::.:     .||.
 Frog   176 ------------TCKVAGNTGQNGSQDAP------LGRKPTSACEKDSAGEMSSSEDEGGSGDYI 222

  Fly   547 PTASLVAAGYSYATSAGSLDNGLRSISLQQLPGLS-SIQHAQAQAQAQAHHHHH-------QHHA 603
            .| |.....::...::|:..|.|.......:|.|| .:..:..:..:|||...:       |.|.
 Frog   223 KT-SPAPECHNQERTSGTYWNSLHPSFYVSVPLLSDQVTLSSKREGSQAHEQGNRLLACGAQGHL 286

  Fly   604 SHPSHSHQGHGSMHQNHGTSSTTPPPSQ-----SGGSHGIDHSPIDRKPAYLPPISPP 656
            ..||     .||.::..|.:......::     |..|..|| |.:.|.....|....|
 Frog   287 GAPS-----PGSNNEKAGATDANCKEAEQLSQKSARSFSID-SILSRSDQSAPECGAP 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 Forkhead 311..399 CDD:278670 41/87 (47%)
foxl1XP_012817795.1 Forkhead 50..136 CDD:365978 40/87 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.