DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Galphai and si:ch211-207c7.2

DIOPT Version :9

Sequence 1:NP_477502.1 Gene:Galphai / 38765 FlyBaseID:FBgn0001104 Length:355 Species:Drosophila melanogaster
Sequence 2:XP_003201106.1 Gene:si:ch211-207c7.2 / 100034591 ZFINID:ZDB-GENE-050208-540 Length:302 Species:Danio rerio


Alignment Length:358 Identity:110/358 - (30%)
Similarity:168/358 - (46%) Gaps:69/358 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GCAVS--TARDKEAIERSKNIDRALRAEGERAASEVKLLLLGAGESGKSTIVKQMKIIHDTGYSQ 64
            ||.|.  :...|.||.::|.||.:...:.:|...|:|||           ::.|.:|     |:|
Zfish     8 GCCVCCLSKNKKNAIAKNKEIDLSFIEQRKRERREIKLL-----------VIDQWQI-----YAQ 56

  Fly    65 EECEEYRRVVFSNTVQSLMVIIRAMGRLKIEFADPSRTDIARQFFTHASAADEGILLPEIVLLMK 129
            :         |.|.....:..:       :.|.:|                            ::
Zfish    57 Q---------FQNQDSHQITEL-------LSFVEP----------------------------IR 77

  Fly   130 KLWADGGVQQSFARSRE-YQLNDSAGYYLNSLDRIAQPNYIPTQQDVLRTRVKTTGIIETHFSCK 193
            .||||.|.:..|...:: ::...|..|:::.|::|...||||...|:.||...|.||.|......
Zfish    78 HLWADEGFKNCFKLCKDNHRHLTSLEYFVDRLEQITANNYIPITADIFRTHSPTNGIAELTIPMN 142

  Fly   194 QLHFKLFDVGGQRSERKKWIHCFEGVTAIIFCVALSGYDLVLAEDEEMNRMIESLKLFDSICNSK 258
            .:.|:.|:|.|||.:||||||.||.||.:||..:||.||..| |:...|||.|||.||:|:.:|.
Zfish   143 SVTFRFFNVSGQRGQRKKWIHHFENVTTVIFVASLSEYDEFL-EENNKNRMEESLPLFNSVTHSP 206

  Fly   259 WFVETSIILFLNKKDLFEEKIKRSPLTICFPEYTGT--NTFEEAANYIRMKFENLNKRKDQKEIY 321
            ||.::.|:|.|||||:...||:.|.|...|||:.|.  || ::|..::...:|. |...| ..||
Zfish   207 WFAQSFILLLLNKKDILARKIQFSHLKTFFPEFEGNIQNT-DDAMKFMLKSYER-NATPD-PWIY 268

  Fly   322 THLTCATDTNNVKFVFDAVTDVIIKNNLKQIGL 354
            :...|..|..:.:.:|:.|.|.|::..:.|..|
Zfish   269 SQFICVKDFTDTRIIFECVKDSIVRQTIAQFEL 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphaiNP_477502.1 G_alpha 14..353 CDD:214595 104/341 (30%)
G-alpha 35..349 CDD:206639 97/316 (31%)
si:ch211-207c7.2XP_003201106.1 G_alpha 22..296 CDD:214595 103/337 (31%)
G-alpha <71..295 CDD:206639 88/255 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.