DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9953 and pcp-1

DIOPT Version :9

Sequence 1:NP_648067.2 Gene:CG9953 / 38763 FlyBaseID:FBgn0035726 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_498688.1 Gene:pcp-1 / 176086 WormBaseID:WBGene00003956 Length:565 Species:Caenorhabditis elegans


Alignment Length:554 Identity:145/554 - (26%)
Similarity:220/554 - (39%) Gaps:116/554 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LLLGLLAPISGMGFRRGRLTK-------GFLGEPSKIPTLQRSLHSEDLWFE-QRLDHFKSSDKR 72
            |:|.|:|.:|....||.||.|       .:...||.:.|         :|:: .:||||...|.|
 Worm     5 LVLLLVALVSVEASRRSRLFKKLYQKASNYDAAPSNVQT---------VWYKNMKLDHFTWGDTR 60

  Fly    73 TWQQRYFVNADFYRNDSSAPVFLMIGGEGEASAKWMREGAWVHYAEHFGALCLQLEHRFYGKSHP 137
            |:..|...|..||:  ...|:|...|.||...:.....|.....|..|.|..:..||||||::.|
 Worm    61 TFDMRVMWNNTFYK--PGGPIFFYTGNEGGLESFVTATGMMFDLAPMFNASIIFAEHRFYGQTQP 123

  Fly   138 TAD---LSTENLHYLSSEQALEDLASFVTAMK-----VKFNLGDGQKWIAFGGSYPGSLAAWARE 194
            ..:   .|..|:.||:|||||.|.|..:|.:|     .|.......:.|:|||||.|.|:||.|:
 Worm   124 FGNQSYASLANVGYLTSEQALADYAELLTELKRDNNQFKMTFPAATQVISFGGSYGGMLSAWFRQ 188

  Fly   195 KYPELIYGSISSSGPLL------------AEVDFKEY-------FEVVKASLAAYKPECVDAVTR 240
            |||.::.|:.:.|.||:            ..:..:.|       |.:..|..|.......|| .|
 Worm   189 KYPHIVKGAWAGSAPLIYMNGGGVDPGAFDHITSRTYIDNGCNRFILANAWNATLNLSSTDA-GR 252

  Fly   241 SFAQVEILLKHMIGQRSLDEKFKTCTPIKDSIENDLD--MANFFENLAGNFAGVVQYNKDNSPHA 303
            .:.....:.|       ||.:.|        |.|..|  ..|.:...|..:..:|.|     |:.
 Worm   253 QWLNNNTVFK-------LDPRTK--------IRNQTDGWNLNAYLREAIEYMAMVDY-----PYP 297

  Fly   304 TITIDDICDVMLNTTAGPPVTRLGLVN---------DMLLKESNTTCLDYKYDK-----MVADMK 354
            |..::.:       .|.|.....|.:|         |::...:|...:.|.|::     ...|. 
 Worm   298 TGFLEPL-------PAWPVTVACGYMNANGTSFSDKDLVKAVANAANIYYNYNRDPNFTYCIDF- 354

  Fly   355 NVSWDSETAKGM----RQWTYQTCHEFGFYQ-TSDNPADTFGDRFGVDFF--IRQ-CMDVFS--- 408
            ::..|..|. |:    ..|.:|.|.|..... .|....|.|.:..|.|.:  ::| |:.:|.   
 Worm   355 SICGDQGTG-GLGGDELGWPWQECSEIIMAMCASGGSNDVFWNECGKDIYQTLQQGCVSIFKSMG 418

  Fly   409 ---KNMNAKFLKLVVSATNDNYGALKPKTTNVLYVHGSIDPWHALGLVKSTNAALPTIY---IEG 467
               ||.|       :.|....||.....::|::...|.:|||...|.....|.|...||   |.|
 Worm   419 WTPKNWN-------IDAVKTLYGYDLSGSSNLILTQGHLDPWSGGGYKVDQNNAARGIYVLEIPG 476

  Fly   468 TAHCANMYEPVKTDPPQLVAARNKILKFLAKLLD 501
            :||..::.:|...||..:..||.:|::.|...:|
 Worm   477 SAHHLDLRQPNTCDPNTVTNARFQIIQILKCWVD 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9953NP_648067.2 Peptidase_S28 61..492 CDD:253262 128/490 (26%)
pcp-1NP_498688.1 Abhydrolase 50..498 CDD:304388 126/486 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D555765at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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