DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mis12 and mis12

DIOPT Version :10

Sequence 1:NP_648066.1 Gene:Mis12 / 38762 FlyBaseID:FBgn0035725 Length:181 Species:Drosophila melanogaster
Sequence 2:NP_001016808.1 Gene:mis12 / 549562 XenbaseID:XB-GENE-1014628 Length:221 Species:Xenopus tropicalis


Alignment Length:208 Identity:52/208 - (25%)
Similarity:89/208 - (42%) Gaps:38/208 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDFNSLAYDQKFFNFTAAQLSAEREHIV-QD-------IIKKGIGQIIDKIK---------TPAT 48
            |..:::.|:.:||.|| .|....|.:|. ||       :::|.|.:.::.::         ..:|
 Frog     1 MSVHAMCYESQFFEFT-PQTCILRVYIAFQDYLFEMLLVVEKVIMKKLESMEGSKISHFQIREST 64

  Fly    49 AELLEAEKETVERRFQASASKGLKALRELDSKVFHVPPHVLHPEHMFVENQY----TSEEEEQKT 109
            .:.|...||.....||...|..||.:..:.|.|..:...| |.::.:.:.::    |..|..||.
 Frog    65 EKYLNFIKERFNILFQKMESWLLKLVLSIPSNVLLLEDKV-HAQYSYSKEEFEHLQTETETLQKK 128

  Fly   110 ARLEELKAKYRENMAMLAHLKIEEEKYAAMEDLIQKEIEMQDRVQRSCSSLNITKLKQ---FWNQ 171
            .:.|.| ||.|    :||.|  ||:|....|  ::|.:...|.:.:.|.......||:   |..|
 Frog   129 CKAESL-AKQR----LLAEL--EEQKQVQAE--LEKTLTWFDGLDKICREHGNIDLKESFGFMTQ 184

  Fly   172 VPLQIK---KETD 181
            ...:::   ||.|
 Frog   185 TSRKLQDKVKEID 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mis12NP_648066.1 None
mis12NP_001016808.1 Mis12 8..141 CDD:461761 34/139 (24%)

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