DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mis12 and Mis12

DIOPT Version :10

Sequence 1:NP_648066.1 Gene:Mis12 / 38762 FlyBaseID:FBgn0035725 Length:181 Species:Drosophila melanogaster
Sequence 2:NP_001381976.1 Gene:Mis12 / 501706 RGDID:1564837 Length:206 Species:Rattus norvegicus


Alignment Length:205 Identity:51/205 - (24%)
Similarity:92/205 - (44%) Gaps:30/205 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDFNSLAYDQKFFNFTAAQ-----LSAEREHI------VQDIIKKGIGQIID-KIKTPATAELLE 53
            |..:.:||:.:||.||...     ..|.::|:      |:.:|.|.:..|.| :|.:..|.:..|
  Rat     1 MSVDPMAYEAQFFGFTPQTCLLRIYIAFQDHLFEVMQAVEQVILKKLEGIPDCEISSIQTRKCTE 65

  Fly    54 AEKETVERRFQASASKGLKALRELDSKVFHVPPHVLHPEHMFVENQYTSEEEEQKTAR-LEELKA 117
            .....::.||.....|..:.:.:   .:..:||::|.||....|....|||:.|...: ::||:.
  Rat    66 KFLCFMKGRFDNLFGKMEQLILQ---SILQIPPNILLPEDKCQETNPFSEEKFQLLKQEIKELQE 127

  Fly   118 KYRENM----AMLAHLKIEEEKYAAMEDLIQ--KEIEMQDRVQ------RSCSSL--NITKLKQF 168
            ||:..:    |:||.|:.::...|.:.:.:.  .|:|...|.|      .|..||  |..||:..
  Rat   128 KYKVELCTEQALLAELEEQKTVKAKLRETLTFFDELENIGRYQGTSNFRESLVSLVQNCRKLQDI 192

  Fly   169 WNQVPLQIKK 178
            .:.|..:.|:
  Rat   193 RDNVEKESKR 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mis12NP_648066.1 None
Mis12NP_001381976.1 Mis12 8..141 CDD:461761 37/149 (25%)

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