DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mis12 and mis12

DIOPT Version :9

Sequence 1:NP_648066.1 Gene:Mis12 / 38762 FlyBaseID:FBgn0035725 Length:181 Species:Drosophila melanogaster
Sequence 2:NP_956672.1 Gene:mis12 / 393349 ZFINID:ZDB-GENE-040426-1372 Length:215 Species:Danio rerio


Alignment Length:161 Identity:32/161 - (19%)
Similarity:70/161 - (43%) Gaps:33/161 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YDQKFFNFTAAQLSAEREHIVQDIIKKGIGQIIDKIKT------------PATAELLEAE----- 55
            |:.:||.||....:..    |:|..:..:..|:..:::            ||...|...|     
Zfish    16 YEAQFFGFTPETCTLR----VRDAFRDSLNHILVAVESVFVKRLCPGRDPPAELRLTARESTQKL 76

  Fly    56 KETVERRFQA--SASKGLKALRELDSKVFHVPPHVLHPEHMFVENQYTSEEE----EQKTAR-LE 113
            ::.::.||:.  ...||:     |..::..:|.:||.||....:.....:||    ::..|: |:
Zfish    77 RQFLQERFEIMFQRMKGM-----LIDRMLSIPQNVLLPEDQMHQKYPEGKEELTKLQESIAKLLQ 136

  Fly   114 ELKAKYRENMAMLAHLKIEEEKYAAMEDLIQ 144
            ..:|:.....|:||.|:.::|....::::::
Zfish   137 AYEAEVCSKQALLAELEEQKETQKQLDEVLR 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mis12NP_648066.1 None
mis12NP_956672.1 Mis12 16..149 CDD:283509 28/141 (20%)
DUF3418 <127..175 CDD:288730 8/41 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_107894
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
21.860

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