DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10064 and Wdr38

DIOPT Version :10

Sequence 1:NP_648065.1 Gene:CG10064 / 38761 FlyBaseID:FBgn0035724 Length:742 Species:Drosophila melanogaster
Sequence 2:NP_083963.1 Gene:Wdr38 / 76646 MGIID:1923896 Length:303 Species:Mus musculus


Alignment Length:285 Identity:73/285 - (25%)
Similarity:116/285 - (40%) Gaps:25/285 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   428 WNDGIIRAFTPI-TGRLIYAIPNAHNKGCSALAVASSGRLIVTGGIEGQVRVWKIDPYRQDLVGV 491
            |....|||.|.: .||:.:...:.....|||.  :..||.::|...:|.|.||.....|  |:..
Mouse     3 WAPMNIRAPTRLAVGRVRFYGQHHGEVNCSAF--SPDGRTLLTASDDGCVYVWGTKSGR--LLWR 63

  Fly   492 LKDHSGPITSLDINYLDTEVISACTDGSCVIWDIKRMTRKQVVTANTQFM-SASYFPTGVQVITC 555
            |..|.||:.|...:.....:.|:.:|.|..:||:.|.....|:..:.:.: :.|:.|...|:.:.
Mouse    64 LAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASG 128

  Fly   556 GSDGRIIYWMVYNGALIRELTASKKSSVNCLAINETGDYFITVGSDLQVKLWDYN-SGAVVGIGS 619
            |.|.|.|.|.|.:|..: .|......|:.....:.|.|...|...|..|.:||.. |..||...:
Mouse   129 GWDKRAIVWEVQSGRRV-HLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHN 192

  Fly   620 -EHASSVISCAYSPCMTMFVTGSTDGSLIIW-----DVPRDFWGR-------PNPPDVTKYSLPK 671
             |..:..|||.......:..:||.|.::.:|     ::|....|.       ...||..|.:...
Mouse   193 LEGHTGNISCLCYSASGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAG 257

  Fly   672 TSSKTRMSDVPSRVNSGTNLKTTKG 696
            .|...::.|    ..:|..|:|.||
Mouse   258 YSRTVKVWD----CLTGKCLETLKG 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10064NP_648065.1 WD40 <59..482 CDD:441893 17/54 (31%)
WD40 repeat 65..106 CDD:293791
WD40 repeat 111..151 CDD:293791
WD40 repeat 159..186 CDD:293791
WD40 366..650 CDD:238121 61/230 (27%)
WD40 repeat 370..407 CDD:293791
WD40 repeat 412..449 CDD:293791 7/21 (33%)
WD40 repeat 456..494 CDD:293791 12/37 (32%)
WD40 repeat 499..535 CDD:293791 8/35 (23%)
WD40 repeat 541..576 CDD:293791 10/35 (29%)
WD40 repeat 583..617 CDD:293791 10/34 (29%)
WD40 repeat 625..651 CDD:293791 7/30 (23%)
Wdr38NP_083963.1 WD40 <18..300 CDD:441893 67/270 (25%)
WD 1 24..63 12/42 (29%)
WD40 repeat 31..66 CDD:293791 13/38 (34%)
WD 2 66..105 10/38 (26%)
WD40 repeat 72..108 CDD:293791 8/35 (23%)
WD 3 108..147 10/39 (26%)
WD40 repeat 113..149 CDD:293791 11/36 (31%)
WD 4 150..189 10/38 (26%)
WD40 repeat 156..194 CDD:293791 10/37 (27%)
WD 5 195..233 8/37 (22%)
WD40 repeat 200..235 CDD:293791 8/34 (24%)
WD 6 236..277 9/44 (20%)
WD 7 279..303 73/285 (26%)
Blue background indicates that the domain is not in the aligned region.

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