DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10064 and Wsb2

DIOPT Version :9

Sequence 1:NP_648065.1 Gene:CG10064 / 38761 FlyBaseID:FBgn0035724 Length:742 Species:Drosophila melanogaster
Sequence 2:NP_067514.2 Gene:Wsb2 / 59043 MGIID:2144041 Length:404 Species:Mus musculus


Alignment Length:238 Identity:54/238 - (22%)
Similarity:102/238 - (42%) Gaps:17/238 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   429 NDGIIRAFTPITGRLIYAIPNAHNKGCSALAVASSGRLI-VTGGIEGQVRVWKIDPYRQDLVGVL 492
            |||.|:.:...||.|:..: :.|......|:...||.|| |:...:..:|:|.::.:.:. :.||
Mouse   131 NDGQIKIWEVQTGLLLLNL-SGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQ-IQVL 193

  Fly   493 KDHSGPITSLDINYLDTEVISACTDGSCVIWDIKRMTR-KQVVTANTQFMSASYFPTGVQVITCG 556
            ..|...:....|:...:.:.||..:.|..:|.::..|. :::....:..:|..:.|....::|..
Mouse   194 SGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTAS 258

  Fly   557 SDGRIIYWMVYNGALIRELTASK-----------KSSVNCLAINETGDYFITVGSDLQVKLWDYN 610
            .|..:|.|..|.|..:|.|..::           .||:..:..:..|.|..||..|..:::|...
Mouse   259 YDTSVIMWDPYTGERLRSLHHTQLEPTMDDSDVHMSSLRSVCFSPEGLYLATVADDRLLRIWALE 323

  Fly   611 SGAVVGIGSEHASSVISCAYSPCMTMFVTGSTDGSLIIWDVPR 653
            ..|.|....  .::.:.|.:.|...:..||:.||.:..|..||
Mouse   324 LKAPVAFAP--MTNGLCCTFFPHGGIIATGTRDGHVQFWTAPR 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10064NP_648065.1 WD40 <25..188 CDD:295369
WD40 33..434 CDD:225201 3/4 (75%)
WD40 repeat 65..106 CDD:293791
WD40 repeat 111..151 CDD:293791
WD40 repeat 159..186 CDD:293791
WD40 280..652 CDD:225201 52/235 (22%)
WD40 366..650 CDD:238121 51/233 (22%)
WD40 repeat 370..407 CDD:293791
WD40 repeat 412..449 CDD:293791 7/19 (37%)
WD40 repeat 456..494 CDD:293791 10/38 (26%)
WD40 repeat 499..535 CDD:293791 6/36 (17%)
WD40 repeat 541..576 CDD:293791 9/34 (26%)
WD40 repeat 583..617 CDD:293791 8/33 (24%)
WD40 repeat 625..651 CDD:293791 7/25 (28%)
Wsb2NP_067514.2 WD40 repeat 29..89 CDD:293791
WD40 <30..182 CDD:330360 15/51 (29%)
WD 1 105..148 7/16 (44%)
WD40 121..360 CDD:238121 51/232 (22%)
WD 2 151..191 9/40 (23%)
WD40 repeat 157..195 CDD:293791 10/38 (26%)
WD 3 195..234 7/38 (18%)
WD40 repeat 200..236 CDD:293791 6/35 (17%)
WD 4 237..276 8/38 (21%)
WD40 repeat 244..289 CDD:293791 10/44 (23%)
WD 5 291..330 10/38 (26%)
WD40 repeat 296..328 CDD:293791 7/31 (23%)
WD40 repeat 336..372 CDD:293791 9/29 (31%)
SOCS_WSB_SWIP 364..402 CDD:239702 1/1 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0266
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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