DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10064 and CG34124

DIOPT Version :10

Sequence 1:NP_648065.1 Gene:CG10064 / 38761 FlyBaseID:FBgn0035724 Length:742 Species:Drosophila melanogaster
Sequence 2:NP_001036333.1 Gene:CG34124 / 4379887 FlyBaseID:FBgn0083960 Length:2003 Species:Drosophila melanogaster


Alignment Length:536 Identity:108/536 - (20%)
Similarity:171/536 - (31%) Gaps:189/536 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 TAGDRHLRLWSILREEKKLYVQDVLMASKTRVFYCARINKTDEFAYLGTGTGDIV---------K 228
            |.|:...|....:.|...|.|:..|:.:....|.....|||.|......|..|.:         :
  Fly    98 TVGENGARPTVFIYEYPSLNVRVKLLNAAQNCFTAGSYNKTGELFASQAGYPDFIITIWRWENAE 162

  Fly   229 IVLNCCDRDHVSKQGSTSCILGAFGTHNPRKPTGRDCNRYVNGVRALYVLEGGRLLIGAGNGDIE 293
            :||.       :|...:..:...|..|||                        .||..:|...|:
  Fly   163 VVLR-------AKSFQSDILFVHFSEHNP------------------------ILLCSSGLSHIK 196

  Fly   294 LVEERTDVPLINFRDYPGPTWPYLRTLKKTHVSGRISSFVRSKTDM-----FYICTDTNEIYGL- 352
            .                   |....|.....:.|.:..|  .|||.     .|:..|.|.|.|. 
  Fly   197 F-------------------WKMANTFTGLKLKGDLGRF--GKTDFSDIYAMYMLQDENVISGSD 240

  Fly   353 --NIKTWVLKLL---------RTCHTKSVYCITFPKNYSGVFATSGKE-CIRIW-------SSGR 398
              |:..|...|:         :.||||.:..||. ||  |...|.|.: .:|:|       :...
  Fly   241 WGNMLLWQAGLIKFEICRKGRKPCHTKPITRITM-KN--GEVTTVGMDGYVRVWYWETVDLADPP 302

  Fly   399 KQELLRIM--VYNFNCA-----CVR---------FTH---DGTSIVSVWNDGIIRAFTPITGRLI 444
            :.:|...:  :|.|..|     |::         |||   ||..  .:|       |..|.   .
  Fly   303 EDDLFVEIDPIYEFKIADVELRCMQKIHPFDESDFTHYAQDGNG--GIW-------FCDIN---T 355

  Fly   445 YAIPNAHNKGCSA-----------------LAVASSGRLIVTGGIEGQVRVWKIDPYRQDLVGVL 492
            |.:|....|..|.                 |.::.||:|.|               |:.|...::
  Fly   356 YDVPQKPRKLYSCIGGKVLAAQMSPVSPHFLCMSESGKLFV---------------YQYDEQRLI 405

  Fly   493 KDHSGPITSLDINYLD-------TEVISACTDGSC--VIWDIK-----RMTRKQVVTANTQFMSA 543
            .:...|...:|:.:||       ||:::|..||..  :..|:.     :|||.:...|:|..::|
  Fly   406 LEKEFPAEGVDVIWLDTNISVKGTELVAAFKDGILRQMYLDLSNGERPKMTRVRAFKAHTSPITA 470

  Fly   544 SYFPTGVQVITCGSDGRIIYWMVYNGALIRELTASKKSSV--------------NCLAINETGDY 594
            ........::..||..:.|:        |.:|:..:...|              ||...:||...
  Fly   471 LTVSRNSSLLLTGSADKSIF--------IYQLSRDEHQMVDMRPLGFVQFAAIPNCFYWHETEPT 527

  Fly   595 FITVGSDLQVKLWDYN 610
            .:.||.. ...|::||
  Fly   528 VVLVGCK-SGDLYEYN 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10064NP_648065.1 WD40 <59..482 CDD:441893 75/378 (20%)
WD40 repeat 65..106 CDD:293791
WD40 repeat 111..151 CDD:293791
WD40 repeat 159..186 CDD:293791 3/12 (25%)
WD40 366..650 CDD:238121 67/317 (21%)
WD40 repeat 370..407 CDD:293791 10/46 (22%)
WD40 repeat 412..449 CDD:293791 11/53 (21%)
WD40 repeat 456..494 CDD:293791 8/54 (15%)
WD40 repeat 499..535 CDD:293791 12/49 (24%)
WD40 repeat 541..576 CDD:293791 5/34 (15%)
WD40 repeat 583..617 CDD:293791 10/42 (24%)
WD40 repeat 625..651 CDD:293791
CG34124NP_001036333.1 WD40 repeat 90..124 CDD:293791 7/25 (28%)
WD40 repeat 131..166 CDD:293791 7/34 (21%)
WD40 135..493 CDD:475233 89/447 (20%)
WD40 repeat 174..217 CDD:293791 12/87 (14%)
WD40 repeat 270..318 CDD:293791 12/50 (24%)
WD40 repeat 323..370 CDD:293791 13/58 (22%)
WD40 repeat 414..462 CDD:293791 12/47 (26%)
WD40 repeat 468..511 CDD:293791 7/50 (14%)
SMC_N <1435..>1631 CDD:481474
Blue background indicates that the domain is not in the aligned region.

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