DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sgl and UGD1

DIOPT Version :9

Sequence 1:NP_476980.1 Gene:sgl / 38760 FlyBaseID:FBgn0261445 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_173979.1 Gene:UGD1 / 839197 AraportID:AT1G26570 Length:481 Species:Arabidopsis thaliana


Alignment Length:479 Identity:296/479 - (61%)
Similarity:367/479 - (76%) Gaps:16/479 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKVCCIGAGYVGGPTCAVMALKCPDIVITLVDKSSERIAQWNSDKLPIYEPGLDEVVKKCRNVNL 65
            :|:||||||||||||.||||||||:|.:.:||.|..||..||||:||||||||::|||:||..||
plant     2 VKICCIGAGYVGGPTMAVMALKCPEIEVVVVDISEPRINAWNSDRLPIYEPGLEDVVKQCRGKNL 66

  Fly    66 FFSTDIETAIKEADLIFISVNTPTKTCGNGKGRAADLKYVESAARMIAEIAQSNKIVVEKSTVPV 130
            |||||:|..:.|:|::|:||||||||.|.|.|:||||.|.||||||||::::|:|||||||||||
plant    67 FFSTDVEKHVFESDIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSSKIVVEKSTVPV 131

  Fly   131 RAAESIMHILRANQKPGIHYDILSNPEFLAEGTAINDLLNADRVLIGGEETPEGHQAVEKLSWIY 195
            |.||:|..||..|.| ||.:.||||||||||||||.||.|.|||||||.:|..|.:|::.|..:|
plant   132 RTAEAIEKILTHNSK-GIEFQILSNPEFLAEGTAIKDLYNPDRVLIGGRDTAAGQKAIKALRDVY 195

  Fly   196 EHWIPKQNILTTNTWSSELSKLAANAFLAQRISSINSLSAVCEATGADVSEVARAVGLDSRIGSK 260
            .||:|.:.|:.||.||:|||||||||||||||||:|::||:||||||||::||.|||.|:|||.|
plant   196 AHWVPVEQIICTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGADVTQVAHAVGTDTRIGPK 260

  Fly   261 FLQASVGFGGSCFQKDILNLIYICENLNLPEVAAYWQQVIDMNEYQKRRFSQKIIESLFNTVSDK 325
            ||.||||||||||||||||||||||...|||.|.||:||:.:|:|||.||:.:::.|:|||||.|
plant   261 FLNASVGFGGSCFQKDILNLIYICECNGLPEAANYWKQVVKVNDYQKIRFANRVVSSMFNTVSGK 325

  Fly   326 RIAILGFAFKKNTGDTRETAAITVCQTLLEEGAALDIYDPKVEPEQIIDDLT-------HPSVTE 383
            :||||||||||:|||||||.||.||..|:.:.|.|.||||:|..|||..||:       ||...:
plant   326 KIAILGFAFKKDTGDTRETPAIDVCNRLVADKAKLSIYDPQVLEEQIRRDLSMARFDWDHPVPLQ 390

  Fly   384 --SPEKVKKAVQIHSDPYSAVRATHALVICTEWDEFVDLDFKRIYQSMMKPAYIFDGRKILDHER 446
              ..|.:.:.|.:.||.|.|.:..|.|.:.||||||..||||:|:.:|.|||::||||.::|..:
plant   391 QIKAEGISEQVNVVSDAYEATKDAHGLCVLTEWDEFKSLDFKKIFDNMQKPAFVFDGRNVVDAVK 455

  Fly   447 LQQIGFHVQTIGKKYQRTGLLRSW 470
            |::|||.|.:|||.      |.||
plant   456 LREIGFIVYSIGKP------LDSW 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sglNP_476980.1 PLN02353 1..459 CDD:177986 291/466 (62%)
UGD1NP_173979.1 PLN02353 1..474 CDD:177986 296/479 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 263 1.000 Domainoid score I470
eggNOG 1 0.900 - - E1_COG1004
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 593 1.000 Inparanoid score I227
OMA 1 1.010 - - QHG60954
OrthoDB 1 1.010 - - D915490at2759
OrthoFinder 1 1.000 - - FOG0002453
OrthoInspector 1 1.000 - - otm2623
orthoMCL 1 0.900 - - OOG6_100511
Panther 1 1.100 - - O PTHR11374
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2176
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

Return to query results.
Submit another query.