DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment sgl and AT3G55940

DIOPT Version :9

Sequence 1:	NP_476980.1	Gene:	sgl / 38760	FlyBaseID:	FBgn0261445	Length:	476	Species:	Drosophila melanogaster
Sequence 2:	NP_191153.1	Gene:	AT3G55940 / 824760	AraportID:	AT3G55940	Length:	584	Species:	Arabidopsis thaliana

Alignment Length:	208	Identity:	42/208 - (20%)
Similarity:	70/208 - (33%)	Gaps:	64/208 - (30%)

- Green bases have known domain annotations that are detailed below.

  Fly   110 RMIAEIAQSNKIVVEKSTVPVRAAESIMHILRANQKPGIHYDILSNPEFLAEGTAINDLLNADRV 174
            |.:.::.:.:|...|::...|.|:.|::|      :.|:|.|......|....:.::.|
plant    47 RFLIDVQKQDKATKEEAQDIVNASSSLLH------RNGLHLDAFFKYLFAVTNSPLSSL------ 99

  Fly   175 LIGGEETPEGHQAVEKLSWIYEHWIPKQNILTTNTWSSELSKLAA-------------------- 219
                    |.||.::.....|..:....:.||.|..||:.|:|..
plant   100 --------EVHQDMDAPLSHYFIYTGHNSYLTGNQLSSDCSELPIIEALKKGVRVIELDIWPNSD 156

  Fly   220 --------NAFLAQRISSINSLSAVCEATGADVSEVARAVGLDSRIGSKFLQASVG------FG- 269
                    ...|...:..|..|.|:.| ...|||:....|.|:..:..| |||.|.      ||
plant   157 EDGIDVLHGRTLTSPVELIKCLRAIRE-HAFDVSDYPVVVTLEDHLTPK-LQAKVAEMVTDIFGE 219

  Fly   270 -------GSCFQK 275
                   |.|.::
plant   220 MLFTPPSGECLKE 232

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
sgl	NP_476980.1	PLN02353	1..459	CDD:177986	42/208 (20%)
AT3G55940	NP_191153.1	PLN02222	1..584	CDD:177868	42/208 (20%)
		EF-hand_like	26..102	CDD:286375	13/74 (18%)
		PI-PLCc_GDPD_SF	102..426	CDD:301322	29/133 (22%)
		C2_PLC_like	454..583	CDD:175974
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000