DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sgl and UGD2

DIOPT Version :9

Sequence 1:NP_476980.1 Gene:sgl / 38760 FlyBaseID:FBgn0261445 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001030792.1 Gene:UGD2 / 822594 AraportID:AT3G29360 Length:480 Species:Arabidopsis thaliana


Alignment Length:468 Identity:298/468 - (63%)
Similarity:372/468 - (79%) Gaps:11/468 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKVCCIGAGYVGGPTCAVMALKCPDIVITLVDKSSERIAQWNSDKLPIYEPGLDEVVKKCRNVNL 65
            :|:||||||||||||.||:||||||:.:.:||.|..||..||||.|||||||||:|||:||..||
plant     2 VKICCIGAGYVGGPTMAVIALKCPDVEVAVVDISVPRINAWNSDTLPIYEPGLDDVVKQCRGKNL 66

  Fly    66 FFSTDIETAIKEADLIFISVNTPTKTCGNGKGRAADLKYVESAARMIAEIAQSNKIVVEKSTVPV 130
            |||||:|..::|||::|:||||||||.|.|.|:||||.|.||||||||:::.|:|||||||||||
plant    67 FFSTDVEKHVREADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSVSDKIVVEKSTVPV 131

  Fly   131 RAAESIMHILRANQKPGIHYDILSNPEFLAEGTAINDLLNADRVLIGGEETPEGHQAVEKLSWIY 195
            :.||:|..||..|.| ||.:.||||||||||||||.||.|.|||||||.|||||.:||:.|..:|
plant   132 KTAEAIEKILTHNSK-GIKFQILSNPEFLAEGTAIKDLFNPDRVLIGGRETPEGFKAVQTLKNVY 195

  Fly   196 EHWIPKQNILTTNTWSSELSKLAANAFLAQRISSINSLSAVCEATGADVSEVARAVGLDSRIGSK 260
            .||:|:..|:|||.||:|||||||||||||||||:|::||:||||||||::|:.|||.|||||.|
plant   196 AHWVPEGQIITTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGADVTQVSYAVGTDSRIGPK 260

  Fly   261 FLQASVGFGGSCFQKDILNLIYICENLNLPEVAAYWQQVIDMNEYQKRRFSQKIIESLFNTVSDK 325
            ||.:||||||||||||||||:||||...|||||.||:|||.:|:|||.||..:::.|:||:||:|
plant   261 FLNSSVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVSSMFNSVSNK 325

  Fly   326 RIAILGFAFKKNTGDTRETAAITVCQTLLEEGAALDIYDPKVEPEQIIDDLT-------HPSVTE 383
            :||:|||||||:|||||||.||.||:.|||:.|.|.||||:|..:||..||:       ||...:
plant   326 KIAVLGFAFKKDTGDTRETPAIDVCKGLLEDKARLSIYDPQVTEDQIQRDLSMNKFDWDHPLHLQ 390

  Fly   384 --SPEKVKKAVQIHSDPYSAVRATHALVICTEWDEFVDLDFKRIYQSMMKPAYIFDGRKILDHER 446
              ||..||: |.:..|.|.|.:..|.:.|.||||||.:|||::|:.:|.|||::||||.|::.::
plant   391 PMSPTTVKQ-VTVTWDAYEATKDAHGICIMTEWDEFKNLDFQKIFDNMQKPAFVFDGRNIMNLQK 454

  Fly   447 LQQIGFHVQTIGK 459
            |::|||.|.:|||
plant   455 LREIGFIVYSIGK 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sglNP_476980.1 PLN02353 1..459 CDD:177986 296/466 (64%)
UGD2NP_001030792.1 PLN02353 1..473 CDD:177986 298/468 (64%)
UDPG_MGDP_dh_N 3..184 CDD:281683 128/181 (71%)
UDPG_MGDP_dh 210..305 CDD:279344 73/94 (78%)
UDPG_MGDP_dh_C 328..451 CDD:281682 64/123 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 263 1.000 Domainoid score I470
eggNOG 1 0.900 - - E1_COG1004
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2520
Inparanoid 1 1.050 593 1.000 Inparanoid score I227
OMA 1 1.010 - - QHG60954
OrthoDB 1 1.010 - - D915490at2759
OrthoFinder 1 1.000 - - FOG0002453
OrthoInspector 1 1.000 - - otm2623
orthoMCL 1 0.900 - - OOG6_100511
Panther 1 1.100 - - O PTHR11374
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2176
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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