DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sgl and plcb1

DIOPT Version :9

Sequence 1:NP_476980.1 Gene:sgl / 38760 FlyBaseID:FBgn0261445 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001072932.2 Gene:plcb1 / 780394 XenbaseID:XB-GENE-6045753 Length:1225 Species:Xenopus tropicalis


Alignment Length:460 Identity:87/460 - (18%)
Similarity:151/460 - (32%) Gaps:119/460 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VGGPTCAVMALKCPDIVITLVDKSSERIAQWNSDKLPIYEPGLDEVVKKCRNVNLFFSTDIETAI 75
            :.|....|.||:...:.::...|...:..:|:.|...:|    ..::|...|....:.||..   
 Frog     1 MAGAQPGVHALQLKRVCVSDNMKKGTKCMKWDDDSTLVY----PIILKMDPNGFFLYWTDQN--- 58

  Fly    76 KEADLIFISV----------NTPTK-------TCGNGKGRAADLKYVESAARM--------IAEI 115
            |||:|:.||:          .||..       ..||..||   |:|     ||        :..|
 Frog    59 KEAELLDISLVKDARCGRHARTPKDPKLREQLEVGNFGGR---LEY-----RMFTIVYGPDLVNI 115

  Fly   116 AQSNKIVVEKSTVPVRAAESI---MHILRAN-------QKPGIHYDILSNPEFLAEGTAINDLLN 170
            :..|.:..::........|..   .::|..|       :|......:.:|||.......||.|.:
 Frog   116 SYLNLVAFQEEIAKEWTDEVFSLATNLLAQNMSRDAFLEKAYTKLKLQANPEGRIPVKNINRLFS 180

  Fly   171 ADRVLIGGEET-------PEGHQAVEKLSWIYEHWIPKQNILTTNTWSSELSKLAANAFLAQRIS 228
            |||..:   ||       |.|.          ...|| |:..|...:...|:.:.....:....|
 Frog   181 ADRKRV---ETALEACNLPSGR----------SDSIP-QDDFTPEVYKVFLNNICPRPEIDNIFS 231

  Fly   229 SINSLSAVCEATGADVSEVARAVGLDSRIG----------------SKFLQAS-VGFGGSCFQKD 276
            ...|.|. ...|..:::|...:...|.|:.                .|:...| :..||....:.
 Frog   232 EFGSKSK-AHLTVDELTEFINSKQRDPRLNEILYPPLKQEQVQQLIEKYEPNSPLATGGQISVEG 295

  Fly   277 ILNLIYICENLNLPEVAAYWQQVIDMNEYQKRRFSQKIIESLFNTVSDKRIAILGFAFKKNTGDT 341
            .:|.:...||..:|      .:.:|:||...:..|...|.|..||.             ...|..
 Frog   296 FMNYLSGEENGVVP------PEKLDLNEDMSQPVSHYFINSSHNTY-------------LTAGQL 341

  Fly   342 RETAAITVCQTLLEEG---AALDIYDPKVEPEQIIDDLTHPSVTESPEKVKKAVQ------IHSD 397
            ...:::.:.:.:|..|   ..||.:..:...|:.:  :||.....:....|:.::      ..:.
 Frog   342 AGNSSVEMYRQVLLAGCRCVELDCWKGRTAEEEPV--ITHGFTMTTEISFKEVIEAIAECAFKTS 404

  Fly   398 PYSAV 402
            ||..|
 Frog   405 PYPVV 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sglNP_476980.1 PLN02353 1..459 CDD:177986 87/460 (19%)
plcb1NP_001072932.2 PH_PLC_beta 22..149 CDD:270167 29/141 (21%)
EFh_PI-PLCbeta1 154..304 CDD:320038 31/164 (19%)
EF-hand motif 154..183 CDD:320038 8/28 (29%)
EF-hand motif 187..215 CDD:320038 8/38 (21%)
EF-hand motif 225..254 CDD:320038 5/29 (17%)
EF-hand motif 271..304 CDD:320038 5/32 (16%)
PI-PLCc_beta 317..646 CDD:176533 18/108 (17%)
C2_PLC_like 680..799 CDD:175974
DUF1154 906..942 CDD:369010
PLC-beta_C 1028..1180 CDD:370077
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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