DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sgl and Plcd3

DIOPT Version :9

Sequence 1:NP_476980.1 Gene:sgl / 38760 FlyBaseID:FBgn0261445 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_690026.2 Gene:Plcd3 / 72469 MGIID:107451 Length:785 Species:Mus musculus


Alignment Length:414 Identity:87/414 - (21%)
Similarity:136/414 - (32%) Gaps:140/414 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 IAQSNKIVVEKSTVPVRAAESI---MHILRA--NQKPGIHYDILSNPE-----FLAEGTAINDLL 169
            ::..|...:|:..|..|...||   |.:.:|  :|.|    :.|.:||     .|.:|..:....
Mouse   424 LSLENHCGLEQQAVMARHLRSILGDMLVTQALDSQNP----EELPSPEQLKGRILVKGKKLPAAR 484

  Fly   170 NAD-RVLIGGEETPEGHQAVEKLSWIYEHWIPKQNILTTNTWSSELSKLAANAFLAQRIS-SINS 232
            :.| |:|...||..|..:..|                       |..:.|.....|::|| .:::
Mouse   485 SEDGRILSDREEEEEEEEEAE-----------------------EALEAAEQRSRAKQISPELSA 526

  Fly   233 LSAVCEATGADVSEVAR------AVG-LDSRIGSKFLQASVGFGGSCFQKD---------ILNLI 281
            |:..|.||.....:.:.      .|| |..|...||.:.:    |:.|.:.         .|.|.
Mouse   527 LAVYCCATRLRTLDPSPGPPQSCTVGSLSERKARKFTREA----GTSFVRHNTQQLTRVYPLGLR 587

  Fly   282 YICENLNLPEVAAYWQ---QVIDMNEYQKRRFSQKIIESLFNTVSDKRIAI---LGFAFKK---- 336
            ....|.|..|:   |.   |::.:|      |.....|...||   .|..|   .|:..|.    
Mouse   588 MNSANYNPQEM---WNSGCQLVALN------FQTPGYEMDLNT---GRFLINGQCGYVLKPAYLR 640

  Fly   337 --NT-------GDTRETAAITV--CQTLLEEGAALDIYDPKV---EPEQIIDDLTHPSVTESPEK 387
              ||       |..|.|.||.|  .|.|           ||:   :|..|:|.|..         
Mouse   641 QLNTTFDPECPGPPRTTLAIQVLTAQQL-----------PKLNAEKPSSIVDPLVR--------- 685

  Fly   388 VKKAVQIHSDPYSAVRATHALVI------CTEWDEFVDLDFKRIYQSMMKPAYI----------- 435
                |:||..|....:.....|:      |  |::  .|.|:.....::...::           
Mouse   686 ----VEIHGVPEDCAQKETDYVLNNGFNPC--WEQ--TLQFRLRAPELVLVRFVVEDYDTTSPND 742

  Fly   436 FDGRKILDHERLQQIGFHVQTIGK 459
            |.|:..|....|:|...|:..:.|
Mouse   743 FVGQSTLPLSSLKQGYRHIHLLSK 766

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sglNP_476980.1 PLN02353 1..459 CDD:177986 86/412 (21%)
Plcd3NP_690026.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..43
PH_PLC_delta 61..177 CDD:270169
PH 66..163 CDD:278594
Substrate binding. /evidence=ECO:0000250 69..97
EF-hand_10 197..246 CDD:291454
PLN02228 251..778 CDD:177873 87/414 (21%)
EF-hand_like 251..332 CDD:286375
PI-PLCc_delta3 332..627 CDD:176567 52/245 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 484..517 9/55 (16%)
C2_PLC_like 656..783 CDD:175974 28/139 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.