DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sgl and plcd1a

DIOPT Version :9

Sequence 1:NP_476980.1 Gene:sgl / 38760 FlyBaseID:FBgn0261445 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001103170.1 Gene:plcd1a / 555443 ZFINID:ZDB-GENE-071004-78 Length:775 Species:Danio rerio


Alignment Length:499 Identity:92/499 - (18%)
Similarity:175/499 - (35%) Gaps:130/499 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 TCAVMALKCPDIVITLVDKSSERIAQWNSDKLPIYEPGLDEVVKKCRNVNLFFSTDIETAIKEAD 79
            :|....||.......:..:.|:.:::.|..::     ||||            ..|::..::..|
Zfish     2 SCPFKPLKRTKSEEFIYQEKSKNVSKENGKRI-----GLDE------------DPDLQFLLRGGD 49

  Fly    80 LIFISVNTPTKTCGNGKGRAADLKYVESAARMIAEIAQSNKIVVEKSTVPVRAAESIMHILRANQ 144
            ||.:..|:..||        ..||..|....:   ...|:|....:|:..:...:|:.   ...|
Zfish    50 LIKVKSNSWKKT--------RFLKLNEDCKTI---YQSSSKAFKRESSFELAEIDSVR---LGRQ 100

  Fly   145 KPGIH---YDILSNPEF--LAEGTAINDLLNADRVLIGGEETPEGHQAVEK-LSWIY-------- 195
            ..|:.   |..:.|..|  :.:|..    .|.|.:....:|......::|| ::.::        
Zfish   101 SEGLQKYTYSSIENRCFSIIFKGRR----ENLDLIASSDDEANCWVNSLEKVINRLHKLNRQQNS 161

  Fly   196 EHWIPKQNILTTNTWSSELSKLAANAFLAQRISSIN-----SLSAVCEATGA---DVSEVARAVG 252
            ||||.:..........:::|......||.|....:|     :|...|:.:.:   :.||:.....
Zfish   162 EHWIYECMRKADKNADNKMSLKELKHFLRQINIEVNDSYAETLFRKCDTSNSGTLEGSEIKLFYN 226

  Fly   253 LDSR------IGSKFLQASVGFGGSCFQKDILNLIYICENLNLPEVAAYWQQVI---DMNEYQKR 308
            |.::      |..|:..::    |...:.|:||.|.:  ....|....|.:::|   :::|..|:
Zfish   227 LLTQRDEIDVIYDKYATSN----GQMSRNDLLNFIQL--EQREPVSLGYAEELIKKYEVDETAKQ 285

  Fly   309 RFSQKIIESLFNTVSDKRIAILGFAFKKNTGDTRETAAITVCQTLLEEGAALDIYDPKVEPEQII 373
                           ||.::..||....|...|            |...|.:|:|....:|    
Zfish   286 ---------------DKHMSKDGFLMYLNQEGT------------LLNPAHIDVYQDMQQP---- 319

  Fly   374 DDLTHPSVTESPEKVKKAVQIH--SDPYSAVRATHALVICTE---WD----EFV---------DL 420
              |.|..::.|........|:.  |...:.::|......|.|   ||    |.|         .:
Zfish   320 --LNHYFISSSHNTYLMEDQLKGPSSTEAYIKALMKSCRCVELDIWDGANGEPVIYYGHTLTSKV 382

  Fly   421 DFKRIYQSMMKPAYIFDGRKIL----DHERLQQ---IGFHVQTI 457
            .||.:.:::...|:......::    :|..|:|   :..|:.||
Zfish   383 PFKDVIKAIKDYAFKASPYPVILSLENHCSLEQQKIVAMHLTTI 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sglNP_476980.1 PLN02353 1..459 CDD:177986 92/499 (18%)
plcd1aNP_001103170.1 PH_PLC_delta 44..159 CDD:270169 24/132 (18%)
PH 44..149 CDD:278594 24/122 (20%)
EF-hand_10 179..228 CDD:291454 9/48 (19%)
PLN02952 232..768 CDD:178538 44/234 (19%)
EF-hand_like 233..313 CDD:286375 21/112 (19%)
PI-PLCc_delta 313..613 CDD:176535 23/120 (19%)
C2_PLC_like 645..770 CDD:175974
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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