DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sgl and plcd1b

DIOPT Version :9

Sequence 1:NP_476980.1 Gene:sgl / 38760 FlyBaseID:FBgn0261445 Length:476 Species:Drosophila melanogaster
Sequence 2:XP_005163413.1 Gene:plcd1b / 337489 ZFINID:ZDB-GENE-030131-9435 Length:772 Species:Danio rerio


Alignment Length:509 Identity:94/509 - (18%)
Similarity:168/509 - (33%) Gaps:146/509 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 ITLVDKSSERIAQWNSDKLPIYEPGLDEVVKKCRNV-------------------NL-------- 65
            :.|:..:.|...:|.|        ||::|:....|:                   ||        
Zfish   128 LDLIASTEEEAKKWVS--------GLEKVISSLNNLSSQKKTEHWIYSSLRKADKNLDNKMSLKE 184

  Fly    66 --FFSTDIETAIKE--ADLIFISVNTPTKTCGNGKGRAADLKYVESAARMIAEIAQSNKIVVE-K 125
              .|..||...:.|  |:::|       |.|....|...:...:|...:::.:..:.:.|..| .
Zfish   185 VKSFLKDINVEVHEDYAEMLF-------KECDKSNGGFLEGNEIEHFYKILTKREEIDVIYGEYA 242

  Fly   126 STVPVRAAESIMHILRANQKPGIHYDILSNPEFLAEGTAINDLLNADRVLIGGEETPEGHQAVEK 190
            .|..:.:|..:::.|...|:               |..:.||.|.    ||...|..|..:|.::
Zfish   243 KTDGLMSANDLLNFLLTEQR---------------EEVSQNDALQ----LIEKYELDENAKAKQQ 288

  Fly   191 LS----WIYEHWIPKQNILTTNTWSS---ELSKLAANAFLAQRISSINSLSAVCEATGADVSEV- 247
            ::    .:|.|  ..:.::......|   ::::..::.|::   ||.|:.....:..|...:|. 
Zfish   289 MTQDGFLMYLH--QPEGLIFNQAHKSVYHDMNQPLSHYFIS---SSHNTYLMEDQLKGPSSTEAY 348

  Fly   248 -------ARAVGLDSRIGSK---------FLQASVGFGGSCFQKDILNLIYICENLNLPEVAAYW 296
                   .|.|.||...||.         .|.:.:.|      ||::..|               
Zfish   349 IRALLKGCRCVELDCWDGSDGEPVIYHGYTLTSKILF------KDVIKAI--------------- 392

  Fly   297 QQVIDMNEYQKRRFSQKIIESLFN--TVSDKRI------AILGFAF-KKNTGDTRETAAITVCQT 352
                  .||..:.....:|.||.|  .|..::|      :|||.|. .|..||...|     |..
Zfish   393 ------KEYAFKTSEYPVILSLENHCGVEQQKIMAQHLTSILGSALVTKPLGDQMPT-----CLP 446

  Fly   353 LLEE--------GAALDIYDPKVEPEQIIDDLTHPSVTESPEKVKKAVQIHSDPYSAVRATHALV 409
            ..||        |..||..:.....|..:.|....|..|..|..::..:..|......:....:|
Zfish   447 APEELKGRFIVKGKRLDKLENAFSDESKMADEESVSEEEDDEGDEENNEKKSGSLKLAKELSDIV 511

  Fly   410 ICTEWDEFVDLDFKRIYQSMMKPAYIFDGR--KILDHERLQQIGFHVQTIGKKY 461
            |..:...|..|:..|...|..:.|...:|:  |:.:....:.|..:...:.:.|
Zfish   512 IYCKSVPFHGLEDSREKHSFYEMASFKEGKALKLAEESATEYIRHNTDKLSRIY 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sglNP_476980.1 PLN02353 1..459 CDD:177986 93/505 (18%)
plcd1bXP_005163413.1 PH_PLC_delta 44..159 CDD:270169 8/38 (21%)
PH 48..150 CDD:278594 7/29 (24%)
EF-hand_10 179..228 CDD:291454 10/55 (18%)
PLN02228 232..764 CDD:177873 74/390 (19%)
EF-hand_like 233..314 CDD:286375 18/101 (18%)
PI-PLCc_delta1 314..610 CDD:176566 56/287 (20%)
C2_PLC_like 643..768 CDD:175974
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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