DRSC/TRiP Functional Genomics Resources

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Protein Alignment sgl and Plch2

DIOPT Version :9

Sequence 1:NP_476980.1 Gene:sgl / 38760 FlyBaseID:FBgn0261445 Length:476 Species:Drosophila melanogaster
Sequence 2:XP_008762618.2 Gene:Plch2 / 313756 RGDID:1304675 Length:1570 Species:Rattus norvegicus


Alignment Length:540 Identity:105/540 - (19%)
Similarity:180/540 - (33%) Gaps:200/540 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GAGYVGGPTCAVMA-----LKCPDIVITLVDKSSERIAQWNSDKLPIYEPGLDEVVKKC-RNVNL 65
            |.|..|....|::|     .:|         .|:||.|:       ....|...:.|:| |:::|
  Rat   102 GCGAGGTSDSALLARRLHGAQC---------HSAERAAR-------TVRRGSPALAKRCPRSLSL 150

  Fly    66 FFS--TDIETAIKEADLIFISVNTPTKTCGNGKGRAADLKYVESAARMIAEIAQ------SNKIV 122
            ..|  ||..:......|  .:||..|...|     ||..|::|.....:.|..|      |:|.:
  Rat   151 SQSQATDHPSPRPRGHL--AAVNAETMDAG-----AAPQKHMERCMSAMQEGTQMVKLRGSSKGL 208

  Fly   123 V-------EKSTVPVRAAESIMHILRANQKPGIHYDILSNPEFLAEGTAINDLLNADRVLIGGEE 180
            |       .:|.:..|.:       |.|:|..|..|.:                         :|
  Rat   209 VRFYYLDEHRSCLRWRPS-------RKNEKAKISIDSI-------------------------QE 241

  Fly   181 TPEGHQAVEKLSWIYEHW-----------------------IPKQNILTTNTWSSELSKLAANAF 222
            ..||.|     |.|::.:                       :...:.....||.:.|..|.|.  
  Rat   242 VSEGRQ-----SEIFQRYPDSSFDPNCCFSIYYGSHRESLDLVSPSSEEARTWVTGLRYLMAG-- 299

  Fly   223 LAQRISSINSLSAVCEATGADVSEVARAVGLDSRIGSKFLQASVGFGGSCFQKDILNLIYICENL 287
                ||..:||:             .|....|..:...|.:|.....||....::|.|::.. |:
  Rat   300 ----ISDEDSLA-------------RRQRTRDQWLKQTFDEADKNGDGSLSISEVLQLLHKL-NV 346

  Fly   288 NLPEVAAYWQQV------IDMNEYQKRRFSQKI--IESLFNTVSDKRIAILGFAFKKNTGDT--- 341
            |||.     |:|      .|.:::|.....::.  ...:.:|..|..:.:|.::..|:..|.   
  Rat   347 NLPR-----QRVKQMFREADTDDHQGTLGFEEFCAFYKMMSTRRDLYLLMLTYSNHKDHLDASDL 406

  Fly   342 -------RETAAITV--CQTLLEE-----------------------GAALDIYDPKVEPEQIID 374
                   ::.:.:|:  ||:::|:                       ..|.||::|  |..::..
  Rat   407 QRFLEVEQKMSGVTLESCQSIIEQFEPCLENKSKGVLGIDGFTNYTRSPAGDIFNP--EHHRVHQ 469

  Fly   375 DLTHP----SVTESPEKVKKAVQIHS----DPYSAVRATHALVICTE---WD----EFV------ 418
            |:|.|    .:|.|........|:.|    |.|:.|  ..|...|.|   ||    |.:      
  Rat   470 DMTQPLSHYFITSSHNTYLVGDQLMSQSRVDMYAWV--LQAGCRCVEVDCWDGPDGEPIVHHGYT 532

  Fly   419 ---DLDFKRIYQSMMKPAYI 435
               .:.||.:.:::.|.|:|
  Rat   533 LTSKILFKDVIETINKYAFI 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sglNP_476980.1 PLN02353 1..459 CDD:177986 105/540 (19%)
Plch2XP_008762618.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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