DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sgl and Plch2

DIOPT Version :9

Sequence 1:NP_476980.1 Gene:sgl / 38760 FlyBaseID:FBgn0261445 Length:476 Species:Drosophila melanogaster
Sequence 2:XP_011248570.1 Gene:Plch2 / 269615 MGIID:2443078 Length:1759 Species:Mus musculus


Alignment Length:557 Identity:109/557 - (19%)
Similarity:172/557 - (30%) Gaps:214/557 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GAGYVGGPTCAVMA-----LKCPDIVITLVDKSSERIAQWNSDKLPIYEPGLDEVVKKC-RNVNL 65
            |.|..|....|::|     .:|         .|:||.|:       ....|...:.|:| ||::|
Mouse   103 GCGAGGTSDSALLARRLHGAQC---------HSAERAAR-------TVRRGPPALAKRCPRNLSL 151

  Fly    66 FFS--TDIETAIKEADLIFISVNTPTKTCGNGKGRAADLKYVESAARMIAEIAQ------SNKIV 122
            ..|  ||..:......|  .:||..|...|     ||..|::|.....:.|..|      |:|.:
Mouse   152 SQSQATDHPSPRPRGHL--AAVNAETMDAG-----AAPQKHMERCMSAMQEGTQMVKLRGSSKGL 209

  Fly   123 V-------EKSTVPVRAAESIMHILRANQKPGIHYDILSNPEFLAEGTAINDLLNADRVLIGGEE 180
            |       .:|.:..|.:       |.|:|..|..|.:                         :|
Mouse   210 VRFYYLDEHRSCLRWRPS-------RKNEKAKISIDSI-------------------------QE 242

  Fly   181 TPEGHQAVEKLSWIYEHW-----------------------IPKQNILTTNTWSSELSKLAANAF 222
            ..||.|     |.|::.:                       :...:.....||.:.|..|.|.  
Mouse   243 VSEGRQ-----SEIFQRYPDSSFDPNCCFSIYHGSHRESLDLVSPSSEEARTWVTGLRYLMAG-- 300

  Fly   223 LAQRISSINSLSAVCEATGADVSEVARAVGLDSRIGSKFLQASVGFGGSCFQKDILNLIYICENL 287
                ||..:||:             .|....|..:...|.:|.....||....::|.|::.. |:
Mouse   301 ----ISDEDSLA-------------RRQRTRDQWLKQTFDEADKNGDGSLSISEVLQLLHKL-NV 347

  Fly   288 NLP-----------------------EVAAYWQQV-------------------IDMNEYQKRRF 310
            |||                       |..|:::.:                   :|.::.|  ||
Mouse   348 NLPRQRVKQMFREADTDDHQGTLGFEEFCAFYKMMSTRRDLYLLMLTYSNHKDHLDASDLQ--RF 410

  Fly   311 --------------SQKIIESLFNTVSDKRIAILGFAFKKNTGDTRE----TAAITVCQTLLEEG 357
                          .|.|||.....:.:|...:||....:......|    ....|...|.....
Mouse   411 LEVEQKMNGVTLESCQNIIEQFEPCLENKSKGMLGIDGSREPSPVMEIHHGAPVYTAGFTNYTRS 475

  Fly   358 AALDIYDPKVEPEQIIDDLTHP----SVTESPEKVKKAVQIHS----DPYSAVRATHALVICTE- 413
            .|.||::|  |..::..|:|.|    .:|.|........|:.|    |.|:.|  ..|...|.| 
Mouse   476 PAGDIFNP--EHNRVHQDMTQPLSHYFITSSHNTYLVGDQLMSQSRVDMYAWV--LQAGCRCVEV 536

  Fly   414 --WD----EFV---------DLDFKRIYQSMMKPAYI 435
              ||    |.:         .:.||.:.:::.|.|:|
Mouse   537 DCWDGPDGEPIVHHGYTLTSKILFKDVIETINKYAFI 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sglNP_476980.1 PLN02353 1..459 CDD:177986 109/557 (20%)
Plch2XP_011248570.1 PH_PLC_eta 193..299 CDD:270170 22/142 (15%)
EFh_PI-PLC 317..477 CDD:333715 26/162 (16%)
EF-hand motif 317..346 CDD:320029 6/29 (21%)
EF-hand motif 353..383 CDD:320029 2/29 (7%)
EF-hand motif 387..415 CDD:320029 4/29 (14%)
EF-hand motif 424..477 CDD:320029 10/52 (19%)
PLN02228 459..1038 CDD:177873 28/119 (24%)
PI-PLCc_eta2 489..898 CDD:176570 21/87 (24%)
PHA03247 <1087..1579 CDD:223021
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.