DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sgl and Plcl1

DIOPT Version :9

Sequence 1:NP_476980.1 Gene:sgl / 38760 FlyBaseID:FBgn0261445 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001108135.1 Gene:Plcl1 / 227120 MGIID:3036262 Length:1096 Species:Mus musculus


Alignment Length:476 Identity:91/476 - (19%)
Similarity:161/476 - (33%) Gaps:170/476 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 SERIAQWNSDKLPIYEPG--LDEVVKKCRNVNLFFS--TDIETAIKEADLIFISVNTPTKTCGNG 95
            ||:......|.:...:.|  |.:|....|..|.||:  ||::....|          |:|     
Mouse   102 SEKKISSAHDCISFMQAGCELKKVRPNSRIYNRFFTLDTDLQALRWE----------PSK----- 151

  Fly    96 KGRAADLKYVESAARMIAEIAQSNKIVVEKSTVPVR-----------AAESIMHILRANQKPGIH 149
                   |.:|.|.   .:|:...:|.:.|:|...|           .|.||:|        |.:
Mouse   152 -------KDLEKAK---LDISAIKEIRLGKNTETFRNNGLADQICEDCAFSILH--------GEN 198

  Fly   150 Y---DILSNPEFLAEGTAINDLLNADRVLIGGEETP----EGHQAVEKLSW---IYEHWIPKQNI 204
            |   |:::|...:|     |..::..|.|:...:.|    ||:|...:..|   ::|......|.
Mouse   199 YESLDLVANSADVA-----NIWVSGLRYLVSRSKQPLDFIEGNQNTPRFMWLKTVFEAADVDGNG 258

  Fly   205 LTTNTWSSEL----------SKL--------AANAFLAQRISSINSLSAVCE-ATGADVSEVARA 250
            :.....|.||          ||:        .:...|..|::......|.|| .|..:|..:...
Mouse   259 IMLEDTSVELIKQLNPTLKESKIRLKFKEIQKSKEKLTTRVTEEEFCEAFCELCTRPEVYFLLVQ 323

  Fly   251 VG-----LDSRIGSKFLQASVGFGGSCFQKDILNLIYICENLNLPEVAAYWQQVIDMNEYQKRRF 310
            :.     ||:.....||:|..|            :.:|.|::.|..:..|     :::|      
Mouse   324 ISKNKEYLDANDLMLFLEAEQG------------VTHITEDMCLDIIRRY-----ELSE------ 365

  Fly   311 SQKIIESLFNTVSDKR----IAILGFAFKKNTGDTRETAAITVCQTLLEEGAALDIYDPKVEPEQ 371
                         |.|    :||.||.                 |.||  ....||:||  |.::
Mouse   366 -------------DGRQKGFLAIDGFT-----------------QYLL--SPECDIFDP--EQKK 396

  Fly   372 IIDDLTHP------SVTESPEKVKKAVQIHSDPYSAVRA----------------THALVICTEW 414
            :..|:|.|      :.:.:...::...:..:|....|||                .:..::|...
Mouse   397 VAQDMTQPLSHYYINASHNTYLIEDQFRGPADINGYVRALKMGCRSIELDVSDGPDNEPILCNRN 461

  Fly   415 DEFVDLDFKRIYQSMMKPAYI 435
            :..:.|.|:.:.:.:.|.|::
Mouse   462 NMAMHLSFRSVLEVINKFAFV 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sglNP_476980.1 PLN02353 1..459 CDD:177986 91/476 (19%)
Plcl1NP_001108135.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..101
Interaction with PPP1C. /evidence=ECO:0000250 83..222 34/157 (22%)
PH_PLC_eta 116..224 CDD:270170 32/145 (22%)
PH 119..224 CDD:278594 32/142 (23%)
EF-hand_like 316..397 CDD:286375 26/137 (19%)
PLN02228 331..851 CDD:177873 37/209 (18%)
PI-PLCc_PRIP_metazoa 399..689 CDD:176539 12/84 (14%)
Interaction with GABA A beta subunit. /evidence=ECO:0000250 544..568
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 550..569
C2_PLC_like 721..849 CDD:175974
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1067..1096
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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