DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sgl and Plcb4

DIOPT Version :9

Sequence 1:NP_476980.1 Gene:sgl / 38760 FlyBaseID:FBgn0261445 Length:476 Species:Drosophila melanogaster
Sequence 2:XP_006498999.1 Gene:Plcb4 / 18798 MGIID:107464 Length:1207 Species:Mus musculus


Alignment Length:483 Identity:99/483 - (20%)
Similarity:159/483 - (32%) Gaps:162/483 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 PTCAVMALKCPDIVITLVDKSSERIAQWNSDK-------LPIYEPGLDEVVKKCRNVNLFFSTDI 71
            |...|:|..|...||:         .|:.|||       :.:|....|.:.|:.| ..:..:..:
Mouse   707 PVDGVIAATCSVQVIS---------GQFLSDKKIGTYVEVDMYGLPTDTIRKEFR-TRMVMNNGL 761

  Fly    72 ETAIKEADLIFISVNTPTKTCGNGKGRAADLKYVESAARMIAEIAQSNKIVVEKSTVPVRAAES- 135
            .....|...:|..|..|            ||     |...||....:||::.:: .:|:...:: 
Mouse   762 NPVYNEESFVFRKVILP------------DL-----AVLRIAVYDDNNKLIGQR-ILPLDGLQAG 808

  Fly   136 IMHILRANQ--KPGIHYDILSNPEFLAEGTAINDLLNADRVLIGGEETPEGH-QAVEKLSWIYEH 197
            ..||...|:  ||      ||.|....     |.:|..        ..|:|. ..|:.||     
Mouse   809 YRHISLRNEGNKP------LSLPTIFC-----NIVLKT--------YVPDGFGDIVDALS----- 849

  Fly   198 WIPKQNILTTNTWSSELSKLAANAFLAQRISSINSLSAVCEATGADVSEVARAVGLDSRIGSK-- 260
             .||:.:..|...:.::                       .|.|.:.|::|......|:...|  
Mouse   850 -DPKKFLSITEKRADQM-----------------------RAMGIETSDIADVPSDTSKNDKKGK 890

  Fly   261 ------------------FLQASVGFGGSCFQKDILNLIYICENLNLPEVAAYW----QQVIDMN 303
                              ...|::|.|...  |..:.||......:|.::.||.    :|..::|
Mouse   891 ANPAKANVTPQSSSELRPTTTAALGSGQEA--KKGIELIPQVRIEDLKQMKAYLKHLKKQQKELN 953

  Fly   304 EYQKRRFSQ-KIIESLFNTVSDKRIA-----------ILGFAFKKNTGDTRETAAITVCQTLLEE 356
            ..:|:...: ..::.|..|..||.:|           ||..|.||..|..               
Mouse   954 SLKKKHAKEHSTMQKLHCTQVDKIVAQYDKEKSTHEKILEKAMKKKGGSN--------------- 1003

  Fly   357 GAALDIYDPKVEPEQIIDDLTHPSVTESPEKVKKAVQIHSDPYSAVRATHALVICTEWDEFVDLD 421
              .|:|   |.|.|..|..||    |:...|||:.|..|:..:|.:..||:    .|..|..||.
Mouse  1004 --CLEI---KKETEIKIQTLT----TDHKSKVKEIVAQHTKEWSEMINTHS----AEEQEIRDLH 1055

  Fly   422 FKRIYQSMMKPAYIFDGRKILDHERLQQ 449
            ..:..:.:         ||:|.:...||
Mouse  1056 LSQQCELL---------RKLLINAHEQQ 1074

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sglNP_476980.1 PLN02353 1..459 CDD:177986 99/483 (20%)
Plcb4XP_006498999.1 PH_PLC_beta 17..143 CDD:270167
EFh_PI-PLCbeta4 148..300 CDD:320041
EF-hand motif 148..177 CDD:320041
EF-hand motif 183..211 CDD:320041
EF-hand motif 221..250 CDD:320041
EF-hand motif 267..300 CDD:320041
PI-PLCc_beta 312..681 CDD:176533
C2_PLC_like 715..831 CDD:175974 31/154 (20%)
PTZ00121 <860..1207 CDD:173412 55/277 (20%)
DUF1154 927..968 CDD:399553 7/40 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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