DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sgl and Plcb3

DIOPT Version :9

Sequence 1:NP_476980.1 Gene:sgl / 38760 FlyBaseID:FBgn0261445 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001277278.1 Gene:Plcb3 / 18797 MGIID:104778 Length:1234 Species:Mus musculus


Alignment Length:526 Identity:109/526 - (20%)
Similarity:165/526 - (31%) Gaps:185/526 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 DKSSERIAQWNSDKLPIYEPGLDEVVKKCRNVNLF---FSTDIETAI-KEADLIFISVNTPTK-- 90
            |||.:          |..|..:|.:|.....|.:.   |.:|.:..| .|.|:..:.|:|..|  
Mouse   710 DKSFD----------PFTEVIVDGIVANALRVKVISGQFLSDKKVGIYVEVDMFGLPVDTRRKYR 764

  Fly    91 ---TCGNGKGRAADLKYVE--------SAARMIAEIAQSNKIVVEKSTVPVRAAESIMHIL---- 140
               :.||......|.:..:        .|:..||...:..|.|..: .:||.|..|..|.:    
Mouse   765 TRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEEGGKFVGHR-ILPVSAIRSGYHYVCLRN 828

  Fly   141 RANQK----------------PGIHYD---ILSNPEFLAEGTAINDLLNADRVLIGG-------- 178
            .|||.                |..|.|   .|.||  :...:.::........|||.        
Mouse   829 EANQPLCLPALLIYTEASDYIPDDHQDYAEALINP--IKHVSLMDQRAKQLAALIGESEAQASTE 891

  Fly   179 --EETP---EGHQAVEKLSWIYEHWIPKQNIL----------TTNTWSSELSKLAANAFLAQRIS 228
              :|||   .|.|....         |..|.|          ||::.||.||.      ..||..
Mouse   892 TYQETPCQQPGSQLPSN---------PTPNPLDASPRWPPGPTTSSTSSSLSS------PGQRDD 941

  Fly   229 SINSLSAVCEATGADVSEV-------------------------ARAVGLDSRIGSKFLQASVGF 268
            .|.|:  :.|.|...:.|:                         .:||.|..|:.....||..  
Mouse   942 LIASI--LSEVTPTPLEELRSHKAMVKLRSRQDRDLRELHKKHQRKAVALTRRLLDGLAQARA-- 1002

  Fly   269 GGSCF-QKDILNLIYICENLNLPEVAAYWQQVIDMNEYQKRRFSQKIIESLFNTVSDKRIAILGF 332
            .|.|. ....|......|::...|.|.           |.|.|..:.::||.    :.|.|....
Mouse  1003 EGKCRPSPSALGKATNSEDVKEEEEAK-----------QYREFQNRQVQSLL----ELREAQADV 1052

  Fly   333 AFKKNTGDTRETAAITVCQTLLEEGAALDIYD------------PKVEPEQIIDDLTHPSVTESP 385
            ..|:.....|:..     |.|.|  ..||.:.            .|.|.::|:|...:.|::|:.
Mouse  1053 ETKRKLEHLRQAH-----QRLKE--VVLDTHTTQFKRLKELNEREKKELQKILDRKRNNSISEAK 1110

  Fly   386 --EKVKKAVQIHSDPYSAVRATHALVICTEWDEFVDLDFKRIYQSMMKPAYIFDGRKILDHERL- 447
              ||.||.|                       |..:::.:.|.:|:.....:.:.:| ..|||| 
Mouse  1111 TREKHKKEV-----------------------ELTEINRRHITESVNSIRRLEEAQK-QRHERLV 1151

  Fly   448 ---QQI 450
               ||:
Mouse  1152 AGQQQV 1157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sglNP_476980.1 PLN02353 1..459 CDD:177986 109/526 (21%)
Plcb3NP_001277278.1 PH_PLC_beta 22..149 CDD:270167
EF-hand_like 225..315 CDD:286375
PI-PLCc_beta 316..694 CDD:176533
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 466..588
C2_PLC_like 729..844 CDD:175974 25/115 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 888..938 14/64 (22%)
BAR 976..>1118 CDD:299863 35/165 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1001..1026 4/26 (15%)
PLC-beta_C 1029..1202 CDD:285865 35/175 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1207..1234
Interaction with SHANK2. /evidence=ECO:0000250 1231..1234
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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