DRSC/TRiP Functional Genomics Resources

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Protein Alignment sgl and sqv-4

DIOPT Version :9

Sequence 1:NP_476980.1 Gene:sgl / 38760 FlyBaseID:FBgn0261445 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_505730.1 Gene:sqv-4 / 179484 WormBaseID:WBGene00005022 Length:481 Species:Caenorhabditis elegans


Alignment Length:459 Identity:304/459 - (66%)
Similarity:370/459 - (80%) Gaps:5/459 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KVCCIGAGYVGGPTCAVMALKCPDIVITLVDKSSERIAQWNSDKLPIYEPGLDEVVKKCRNVNLF 66
            ||.|:|||||||||||::|.|||.|.:|:||.::.:||:|||||||||||||||:|...|..|||
 Worm    11 KVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLF 75

  Fly    67 FSTDIETAIKEADLIFISVNTPTKTCGNGKGRAADLKYVESAARMIAEIAQSNKIVVEKSTVPVR 131
            ||:||..||.||||||||||||||..|.|||.|.|||||||.:|.||:.|...|||||||||||:
 Worm    76 FSSDIPKAIAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVK 140

  Fly   132 AAESIMHILRANQK--PGIHYDILSNPEFLAEGTAINDLLNADRVLIGGEETPEGHQAVEKLSWI 194
            |||||..|||..||  ..:.:.:||||||||||||:.||.|.||||||||.:|||.|||.:|..|
 Worm   141 AAESIGCILREAQKNNENLKFQVLSNPEFLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRI 205

  Fly   195 YEHWIPKQNILTTNTWSSELSKLAANAFLAQRISSINSLSAVCEATGADVSEVARAVGLDSRIGS 259
            ||:|:|:..|:||||||||||||.||||||||||||||:|||||||||::||||.|||.|:||||
 Worm   206 YENWVPRNRIITTNTWSSELSKLVANAFLAQRISSINSISAVCEATGAEISEVAHAVGYDTRIGS 270

  Fly   260 KFLQASVGFGGSCFQKDILNLIYICENLNLPEVAAYWQQVIDMNEYQKRRFSQKIIESLFNTVSD 324
            |||||||||||||||||:|:|:|:||:||||:||.|||.||::|.:|:|||:.|||..|||||:|
 Worm   271 KFLQASVGFGGSCFQKDVLSLVYLCESLNLPQVADYWQGVININNWQRRRFADKIIAELFNTVTD 335

  Fly   325 KRIAILGFAFKKNTGDTRETAAITVCQTLLEEGAALDIYDPKVEPEQIIDDLTHPSVTESPEKVK 389
            |:|||.|||||||||||||::||.|.:.|:||.|.|.:|||||:..|:::||.  ||| |.:.|:
 Worm   336 KKIAIFGFAFKKNTGDTRESSAIHVIKHLMEEHAKLSVYDPKVQKSQMLNDLA--SVT-SAQDVE 397

  Fly   390 KAVQIHSDPYSAVRATHALVICTEWDEFVDLDFKRIYQSMMKPAYIFDGRKILDHERLQQIGFHV 454
            :.:.:.||||:|.|..||:|:.|||||||:|::.:|:..|..||.|||||.|||.:.|::|||..
 Worm   398 RLITVESDPYAAARGAHAIVVLTEWDEFVELNYSQIHNDMQHPAAIFDGRLILDQKALREIGFRT 462

  Fly   455 QTIG 458
            ..||
 Worm   463 FAIG 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sglNP_476980.1 PLN02353 1..459 CDD:177986 304/459 (66%)
sqv-4NP_505730.1 PLN02353 11..471 CDD:177986 304/459 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165975
Domainoid 1 1.000 250 1.000 Domainoid score I1156
eggNOG 1 0.900 - - E1_COG1004
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2520
Inparanoid 1 1.050 603 1.000 Inparanoid score I506
Isobase 1 0.950 - 0 Normalized mean entropy S2080
OMA 1 1.010 - - QHG60954
OrthoDB 1 1.010 - - D436314at33208
OrthoFinder 1 1.000 - - FOG0002453
OrthoInspector 1 1.000 - - oto20127
orthoMCL 1 0.900 - - OOG6_100511
Panther 1 1.100 - - LDO PTHR11374
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6673
SonicParanoid 1 1.000 - - X2176
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1716.790

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