DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sgl and plcb1

DIOPT Version :9

Sequence 1:NP_476980.1 Gene:sgl / 38760 FlyBaseID:FBgn0261445 Length:476 Species:Drosophila melanogaster
Sequence 2:XP_021323210.1 Gene:plcb1 / 101886206 -ID:- Length:1059 Species:Danio rerio


Alignment Length:489 Identity:97/489 - (19%)
Similarity:168/489 - (34%) Gaps:163/489 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 VDKSSERI-AQWNSD-KLPIYEPGLDEVVKKCRNVNLFFSTD---IETAIKEADLIFISVNTPTK 90
            ::|:..|: .|.|.: ::|:            :||:..||||   :|||::       |.|.|:.
Zfish   153 LEKAFTRLKLQTNQEGRIPV------------KNVSRVFSTDRKRVETALE-------SCNLPSG 198

  Fly    91 ------TCGNGKGRAADLKYVESAARMIAEIAQSNKIVVEKSTVPVRAAESIMHILRANQKPGIH 149
                  .|...|.|    .|:        .:.|..:.:..|...| |..|.:...|:.:|...:.
Zfish   199 RCVCVCVCSGAKSR----NYL--------SMEQMTEFINNKQRDP-RLNEILYPPLKPDQTHALM 250

  Fly   150 YDILSNPEFLAEGTAIND-----LLNADRVLIGGEETPEGHQAVEKLSWIYEHWIPKQNILTTNT 209
            .....|.||:.:|....:     |::.|..:|..|:..:.......||   :::|...:    ||
Zfish   251 EKFEPNAEFIQKGQISVEGFSRYLISEDNSVIPPEKLDQSEDMTYPLS---QYFINSSH----NT 308

  Fly   210 WSSELSKLAANAFLAQRISSINSLSAVCEATGADVSEVARAVGLDSRIGSKFLQASVGFGGSCFQ 274
            :.:..:...|..||   .:..|:...:.|.....:.||..|:            |...|..|.|.
Zfish   309 YLTGTANTHACLFL---FNKSNAFLRLIEIIAVVLQEVIEAI------------ADCAFKTSPFP 358

  Fly   275 KDILNLIYICEN-LNLPEVAAYWQQVIDMNEYQKRRFSQKIIESLFNTVSDKRIAILGFAFKKNT 338
                 :|...|| ::.|      :|...|.||         ..|:|                   
Zfish   359 -----VILSFENHVDSP------KQQAKMAEY---------CRSIF------------------- 384

  Fly   339 GDTRETAAITVCQTL----LEEGAALDIYDPKVEPEQIIDDL------THPSVTESPEKVK---K 390
            ||    |.:|  :||    ||.|.      |...|::::..:      :||...:...|.|   :
Zfish   385 GD----ALLT--ETLEKYPLEPGT------PLPSPQELMGKILIKNKKSHPKAADGSTKKKLSEQ 437

  Fly   391 AVQIHSDPYSAVR--------------ATHALVICTEWDEFV----DLDFK---------RIYQS 428
            |...:||..|...              .:|.|:|..|....|    ..||:         |:...
Zfish   438 ASNTNSDSSSVFEPSSPSAGPAGTQKSQSHVLLISVEQTLIVITIATCDFRVITIATCDCRVITI 502

  Fly   429 MMKPAYIFDGRKILDHERLQQIGFHVQTIGKKYQ 462
            ::...::.| ||:..:..:...|..|.|..|.::
Zfish   503 IISGQFLTD-RKVGVYVEIDMFGLPVDTRRKAFK 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sglNP_476980.1 PLN02353 1..459 CDD:177986 96/484 (20%)
plcb1XP_021323210.1 PH_PLC_beta 22..149 CDD:270167
EFh_PI-PLC 154..278 CDD:333715 33/155 (21%)
EF-hand motif 154..183 CDD:320029 10/40 (25%)
EF-hand motif 245..278 CDD:320029 6/32 (19%)
PI-PLCc_GDPD_SF 290..>420 CDD:326331 38/202 (19%)
C2_PLC_like 503..617 CDD:175974 7/34 (21%)
DnaJ <648..>782 CDD:333066
DUF1154 727..770 CDD:310911
PLC-beta_C 814..1032 CDD:312287
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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