DRSC/TRiP Functional Genomics Resources

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Protein Alignment sgl and plch1

DIOPT Version :9

Sequence 1:NP_476980.1 Gene:sgl / 38760 FlyBaseID:FBgn0261445 Length:476 Species:Drosophila melanogaster
Sequence 2:XP_031758196.1 Gene:plch1 / 100497252 XenbaseID:XB-GENE-6042445 Length:1661 Species:Xenopus tropicalis


Alignment Length:428 Identity:82/428 - (19%)
Similarity:147/428 - (34%) Gaps:147/428 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 QWNSDKLPIYEPGLDEVVKKCRNVNLFFSTDIETAI--------KEADLIFISVNT-PTKTCGNG 95
            :|.|  |.:.:...|::    |.:|..|:::.:..|        |||.|:...:.: |..|..:.
 Frog  1088 KWRS--LHLEKQNYDDI----RELNDTFTSESDEEILKPKEGNEKEAMLLLDKMESIPENTKHHA 1146

  Fly    96 KGRAADLKYVESAARMIAEIAQSNKIVVEKSTVPVRAAESIMHILRANQKPGI------------ 148
            |   |||..|...:..|.  ...|.:   :||.|:...: |.||:  ::.|.:            
 Frog  1147 K---ADLFSVTDLSSTIC--TDMNHL---QSTAPLLETD-ISHII--SEVPSVNESELGSTVSAL 1200

  Fly   149 --HYDIL---SNPEFLA--------------EGTAINDLLN------------ADRVLIGGEETP 182
              |::|.   :|..|::              ....|:||||            ::..:....||.
 Frog  1201 IRHFEITEDKTNLTFVSSLQGPNSQSNFCDNSDVLISDLLNRKKHTRQSLHSASNTTVFSSPETS 1265

  Fly   183 EGHQAVEKLSWIYEHWIP---KQNILTTNTWSSELSKL---AANAFLAQRISSINSLSAVCEATG 241
            |    ....::|:|..:|   ...::..|...|..|.|   ::|::|    .|..||. .|....
 Frog  1266 E----YSIYTFIHEEHVPPDANYKLMDANNGISSCSNLKNNSSNSWL----DSSESLQ-FCSQYN 1321

  Fly   242 ADVSEVARAVGLDSRIGSKFLQASVGFGGSCFQKDILNLIYICENLNLPEVAAYWQQVIDMNEYQ 306
            |:    :..:||.|:....  |.|:.....|..:::                   :|:...|.:.
 Frog  1322 AN----SNTLGLKSKQSRP--QVSLKTSSGCTDENV-------------------KQISSHNSFL 1361

  Fly   307 KRRFSQKIIESLFNTVSD-KRIAILGFAFKKNTGDTRETAAITVC----QTLLEEGAAL------ 360
            |.          .|..|: ||||...|.   :||..|  .|...|    .|.::.|:..      
 Frog  1362 KN----------LNVDSNPKRIADKNFL---HTGVNR--YATQACPNSQNTGIQHGSGQLYQNRH 1411

  Fly   361 DIYDPKVEPEQIIDDLTHPSVTESPEKVKKAVQIHSDP 398
            ..|.|:.:            .....:.:.::..:||.|
 Frog  1412 SSYKPRAD------------APRDKQYIAQSGNLHSSP 1437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sglNP_476980.1 PLN02353 1..459 CDD:177986 82/428 (19%)
plch1XP_031758196.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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