DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sgl and LOC100488276

DIOPT Version :9

Sequence 1:NP_476980.1 Gene:sgl / 38760 FlyBaseID:FBgn0261445 Length:476 Species:Drosophila melanogaster
Sequence 2:XP_002942363.2 Gene:LOC100488276 / 100488276 -ID:- Length:1102 Species:Xenopus tropicalis


Alignment Length:538 Identity:106/538 - (19%)
Similarity:186/538 - (34%) Gaps:154/538 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 DIVITLVDKSSERIAQWNSDKLPIYEPGLDEVVKKCRNVNLFFSTDIETAIKEADLIFISVNTPT 89
            :|...|.:...|.:.:....||.:.:. |.::|..|::|..   .|.||:  .:...:..|::..
 Frog   563 EIARRLGNDGEEHLGEAGHRKLRLCKE-LSDLVNLCQSVKF---RDFETS--RSSQKYWQVSSFN 621

  Fly    90 KTCGNGKGRAADLKYVESAARMIAEIAQSNKIVVEKSTVPVRAAESIMHILRAN-QKPGIHYDI- 152
            :...:........::|....|.::.:..|:..:...:..|....:....|:..| |.||:..|: 
 Frog   622 EVAASRFSNEYPEEFVRYNKRFLSRVYPSSMRIDASNMNPQDFWKCGCQIVAMNFQTPGLMMDLN 686

  Fly   153 ------------LSNPEFLAEGTAINDLLNADRV-----------LIGGEE--TPEGHQA----V 188
                        :..|..:.|..:.......|.:           :|.|:.  .|:|..|    |
 Frog   687 TGWFRQNGNCGYVLRPAIMREEVSYFSANAKDSLPGVSAQLLYIKIISGQNLPKPKGSGAKGDVV 751

  Fly   189 EKLSWIYEHWIP------KQNILTTN----------TWSSELSKLA------------ANAFLAQ 225
            |...::..|.||      :...:|.|          .:...|.:||            .:.|:||
 Frog   752 EPYVYVEIHGIPADCAEHRTKTVTQNGDNPIFDESFEFHINLPELAILRFVVLDDDFIGDEFIAQ 816

  Fly   226 RISSINSLSAVCEATGADVSEVARAVGLDSRIGSKFLQASVGF---------GGSCFQKDILNLI 281
                 .::...|..||      .|.|.|.|..| :|||.:..|         ||...||..|   
 Frog   817 -----YTIPFECLQTG------FRHVPLQSLTG-EFLQNTTLFVHIAITNRRGGGKAQKKGL--- 866

  Fly   282 YICENLNLPEVAAYWQQVIDMNEYQKRRFSQ-KIIESLFNT-------VSDKRIAILG--FAFKK 336
                         |.::...:.||...:.:. |.|:.:|.|       .:|.|..:..  .:||:
 Frog   867 -------------YVRKGKKVREYTSTKTTGIKAIDEVFRTATPSLREATDLRENVQNALVSFKE 918

  Fly   337 NTGDT----RETAAITVCQTLLEEGAALDI-------YDPKVEPEQIIDDLTHPSVTESPEKVKK 390
            ..|.|    .:...:||...||...:.|.:       | |.:|.:..:           ||.:||
 Frog   919 LCGLTPAANMKQCILTVSAWLLNNDSPLTVTLNLRSQY-PTLEAQGPV-----------PELLKK 971

  Fly   391 AVQIHSDPYSA-VRATHALVICTEWDEFVDLDFKRIYQSMMKPAYIFDGRKILDHERLQQIGFHV 454
            .:.    .|.| ::|:..|:      |..|:.:.:|.| :.|....|       ||.|.:||...
 Frog   972 VLA----SYEAFIQASRTLI------ETADVVYSKIIQ-VQKAGMGF-------HEDLHRIGAKE 1018

  Fly   455 QTIGKKYQRTGLLRSWGI 472
            ...|:|.|:.....:|.|
 Frog  1019 GLKGRKLQKVMESFAWNI 1036

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sglNP_476980.1 PLN02353 1..459 CDD:177986 101/523 (19%)
LOC100488276XP_002942363.2 PH_PLC_eta 115..223 CDD:270170
EFh_PRIP 243..385 CDD:320036
EF-hand motif 243..272 CDD:320036
EF-hand motif 279..311 CDD:320036
EF-hand motif 315..343 CDD:320036
EF-hand motif 352..385 CDD:320036
PI-PLCc_GDPD_SF 397..693 CDD:387364 23/135 (17%)
C2_PLC_like 725..853 CDD:175974 30/139 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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